Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 86.0 5e-12
>seq6977
Length=186913
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||||||||| ||||||| || || || ||| | || |||||| |
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| |||| |||||| | || |||||| | || |||||||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGA 24986
|| ||| | || | ||| |||||||| |||||||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGA 61353
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || || ||| | ||||||||||| || ||| | || ||||| |
Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | | | |||| ||| |||| ||| || | || ||||| | || ||||||
Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAG 63115
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| ||| | || | ||| |||||||| ||||||||| | || | || ||||
Sbjct 63116 CAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAT 63175
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCA 25061
|| ||||| ||| |||| || ||||| || | ||| | ||||| || ||
Sbjct 63176 ATCCAGAAGGAGTCCACTCTCCATTTGGTTCTGCGACTCCGCGGTGGCCA 63225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413324730754400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |