Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6977 147 2e-30 seq7011 132 4e-26 >seq6977 Length=186913 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || |||||| |||| || ||| | || Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||||| |||||| || || || ||||||||||||| | || |||||||| Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAG-ATTCAGGACAAGGAAGGCATTCCCCCCGACCA 62430 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || ||||| || || |||||||||||| ||| | || ||||| Sbjct 62431 ACAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAA 62490 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || || ||||| || || || || | || |||| Sbjct 62491 TATTCAAAAAGAATCTACCCTCCATCTTGTCCTCAGGCTTCGTGGTGGTA 62540 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || ||||| ||||| || |||||| |||| || ||| | || Sbjct 62768 ATGCAGATTTTCGTTAAAACCCTGACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62827 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||||||| | || ||||||||| Sbjct 62828 GACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 62887 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||||||| ||||||| || | ||||| || Sbjct 62888 CAGCGTCTCATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAT 62947 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||||||||| || ||||| || ||||| ||| | ||||||| Sbjct 62948 ATCCAGAAAGAATCGACCCTCCATCTTGTGCTTAGGCTGCGTGGCGGTA 62996 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || ||||| || || ||| | || || || | || Sbjct 61426 CATGCAAATTTTCGTTAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTAGAGGCTTC 61485 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | |||| || || || ||| | |||||||||||| | || ||||||| Sbjct 61486 GGACACCATTGAAAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCCGACC 61544 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || || || ||||| || ||||||||| | ||| || ||||| | Sbjct 61545 AGCAGCGTCTTATTTTTGCCGGCAAGCAATTGGAAGACGGTCGCACTCTGTCTGATTACA 61604 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| || ||||| || || ||||| || || || || | || |||| Sbjct 61605 ATATTCAGAAGGAATCCACCCTCCATCTTGTCCTCAGGCTTCGTGGAGGTA 61655 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || ||||| || ||||| |||| |||||| | || Sbjct 60742 CATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACGCTCGAAGTTGAAGCCTC 60801 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || |||||||| Sbjct 60802 TGACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 60861 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| || |||| ||| || | ||||| || Sbjct 60862 GCAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGACGGACGTACCCTCTCTGATTACAA 60921 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| || || ||||| || ||||| ||| | ||||||| Sbjct 60922 TATCCAGAAAGAATCTACCCTCCATCTTGTGCTTAGGCTGCGTGGCGGTA 60971 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || ||||| || || || || |||||| | || || ||| | || Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| || ||||||||| | || || |||||| Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||||||||||||||||||| | || || || || || Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| ||||| |||||||| |||| || Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCT 61410 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| || || ||||| ||||| ||||| || | || || ||| | || Sbjct 62083 CATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTC 62142 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || | ||| |||||| |||||| | || |||||||| Sbjct 62143 GGATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCA 62202 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || ||||| || || ||| | |||||| || || || || || Sbjct 62203 ACAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAA 62262 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||||||| ||||| |||| || | |||| || |||| Sbjct 62263 CATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGGTA 62312 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| |||||||| || || || ||||| || |||||| |||| || ||| | || Sbjct 62540 ATGCAAATCTTCGTAAAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCA 62599 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || || ||| | ||| |||||||| | || ||||| || Sbjct 62600 GACACCATAGAAAATGTAAAGGCAAAGA-TCCAGGATAAGGAAGGTATTCCCCCCGATCA 62658 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | ||||| | ||| || || || || Sbjct 62659 GCAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAA 62718 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || || || |||| || | ||| | || |||| Sbjct 62719 TATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGTA 62768 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || |||||||| |||||| | || || || | || Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | |||| || || || ||| | ||| |||||||| | || |||||||| Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGA-TCCAGGATAAGGAAGGTATTCCCCCCGACCA 63114 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || || || ||||||||| ||||||| Sbjct 63115 GCAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGA 63150 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || || || |||||| | || || || | || Sbjct 61655 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACAATCACCCTGGAAGTCGAGGCTTCG 61714 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || || || || ||| |||||||| | || |||||||| Sbjct 61715 GACACCATTGAAAACGTGAAGGCAAAG-ATCCAGGATAAGGAAGGTATTCCCCCCGACCA 61773 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | ||||| | ||| || || || || Sbjct 61774 ACAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAA 61833 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || || || |||| || | ||| | || |||| Sbjct 61834 TATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGTA 61883 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||||||| | || ||||||||||||||||| || || |||||||||||| |||| Sbjct 61948 GGACAAGGAAGGCATTCCCCCCGACCAGCAGCGTCTCATCTTTGCTGGCAAACAGCTGGA 62007 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | || | ||||| || || ||||| || || ||||| || || || || Sbjct 62008 AGATGGTCGTACCCTCTCTGATTACAATATCCAAAAGGAGTCTACTCTCCACCTTGTGCT 62067 Query 31405 TAGACTGAGGGGCGG 31419 |||||| | || || Sbjct 62068 CAGACTGCGTGGTGG 62082 >seq7011 Length=120798 Score = 132 bits (146), Expect = 4e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || ||| || | ||||| || ||||| || || || || || || || || ||| || Sbjct 26895 GCGGAGCGGATCATCGCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCC 26954 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| ||||||| ||||||||||||||||||||||| || ||||||||| | Sbjct 26955 TCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTT 27014 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 || || || |||||||| ||||| || || ||||| ||||| |||||| Sbjct 27015 ATCTCCCGGGACGAGGGGCTCCACACCGACTTTGCCTGCCTTATGTAC 27062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440324177324400