Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 147 2e-30
seq7011 132 4e-26
>seq6977
Length=186913
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || |||||| |||| || ||| | ||
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | |||||| |||||| || || || ||||||||||||| | || ||||||||
Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAG-ATTCAGGACAAGGAAGGCATTCCCCCCGACCA 62430
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| ||||| || ||||| || || |||||||||||| ||| | || |||||
Sbjct 62431 ACAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAA 62490
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || || ||||| || || || || | || ||||
Sbjct 62491 TATTCAAAAAGAATCTACCCTCCATCTTGTCCTCAGGCTTCGTGGTGGTA 62540
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || ||||| ||||| || |||||| |||| || ||| | ||
Sbjct 62768 ATGCAGATTTTCGTTAAAACCCTGACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62827
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||||||| | || |||||||||
Sbjct 62828 GACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 62887
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || |||||||||||| ||||||| || | ||||| ||
Sbjct 62888 CAGCGTCTCATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAT 62947
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || ||||||||||| || ||||| || ||||| ||| | |||||||
Sbjct 62948 ATCCAGAAAGAATCGACCCTCCATCTTGTGCTTAGGCTGCGTGGCGGTA 62996
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || ||||| || || ||| | || || || | ||
Sbjct 61426 CATGCAAATTTTCGTTAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTAGAGGCTTC 61485
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| | |||| || || || ||| | |||||||||||| | || |||||||
Sbjct 61486 GGACACCATTGAAAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGAATCCCTCCCGACC 61544
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||||| || || || ||||| || ||||||||| | ||| || ||||| |
Sbjct 61545 AGCAGCGTCTTATTTTTGCCGGCAAGCAATTGGAAGACGGTCGCACTCTGTCTGATTACA 61604
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| || ||||| || || ||||| || || || || | || ||||
Sbjct 61605 ATATTCAGAAGGAATCCACCCTCCATCTTGTCCTCAGGCTTCGTGGAGGTA 61655
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| || || || || ||||| || ||||| |||| |||||| | ||
Sbjct 60742 CATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACGCTCGAAGTTGAAGCCTC 60801
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || ||||||||
Sbjct 60802 TGACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 60861
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || |||||||| || |||| ||| || | ||||| ||
Sbjct 60862 GCAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGACGGACGTACCCTCTCTGATTACAA 60921
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||| || || ||||| || ||||| ||| | |||||||
Sbjct 60922 TATCCAGAAAGAATCTACCCTCCATCTTGTGCTTAGGCTGCGTGGCGGTA 60971
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || || ||||| || || || || |||||| | || || ||| | ||
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | ||| || ||||||||| | || || ||||||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||||||||||||||||||| | || || || || ||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||| ||||| |||||||| |||| ||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCT 61410
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| || || ||||| ||||| ||||| || | || || ||| | ||
Sbjct 62083 CATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTC 62142
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | || || | ||| |||||| |||||| | || ||||||||
Sbjct 62143 GGATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCA 62202
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||||| || ||||| || || ||| | |||||| || || || || ||
Sbjct 62203 ACAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAA 62262
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||||||| ||||| |||| || | |||| || ||||
Sbjct 62263 CATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGGTA 62312
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| |||||||| || || || ||||| || |||||| |||| || ||| | ||
Sbjct 62540 ATGCAAATCTTCGTAAAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCA 62599
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | |||| || || || ||| | ||| |||||||| | || ||||| ||
Sbjct 62600 GACACCATAGAAAATGTAAAGGCAAAGA-TCCAGGATAAGGAAGGTATTCCCCCCGATCA 62658
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | ||||| | ||| || || || ||
Sbjct 62659 GCAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAA 62718
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || || || |||| || | ||| | || ||||
Sbjct 62719 TATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGTA 62768
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/156 (75%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || |||||||| |||||| | || || || | ||
Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | | |||| || || || ||| | ||| |||||||| | || ||||||||
Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGA-TCCAGGATAAGGAAGGTATTCCCCCCGACCA 63114
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||||||| || || || ||||||||| |||||||
Sbjct 63115 GCAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGA 63150
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || || || || |||||| | || || || | ||
Sbjct 61655 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACAATCACCCTGGAAGTCGAGGCTTCG 61714
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | |||| || || || || || ||| |||||||| | || ||||||||
Sbjct 61715 GACACCATTGAAAACGTGAAGGCAAAG-ATCCAGGATAAGGAAGGTATTCCCCCCGACCA 61773
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||||| || ||||| ||||| ||| | ||||| | ||| || || || ||
Sbjct 61774 ACAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAA 61833
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || || || |||| || | ||| | || ||||
Sbjct 61834 TATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGTA 61883
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
||||||||||||| | || ||||||||||||||||| || || |||||||||||| ||||
Sbjct 61948 GGACAAGGAAGGCATTCCCCCCGACCAGCAGCGTCTCATCTTTGCTGGCAAACAGCTGGA 62007
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| | || | ||||| || || ||||| || || ||||| || || || ||
Sbjct 62008 AGATGGTCGTACCCTCTCTGATTACAATATCCAAAAGGAGTCTACTCTCCACCTTGTGCT 62067
Query 31405 TAGACTGAGGGGCGG 31419
|||||| | || ||
Sbjct 62068 CAGACTGCGTGGTGG 62082
>seq7011
Length=120798
Score = 132 bits (146), Expect = 4e-26
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025
|| ||| || | ||||| || ||||| || || || || || || || || ||| ||
Sbjct 26895 GCGGAGCGGATCATCGCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCC 26954
Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085
| || || ||| ||||||| ||||||||||||||||||||||| || ||||||||| |
Sbjct 26955 TCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTT 27014
Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133
|| || || |||||||| ||||| || || ||||| ||||| ||||||
Sbjct 27015 ATCTCCCGGGACGAGGGGCTCCACACCGACTTTGCCTGCCTTATGTAC 27062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440324177324400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |