Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 84.2 2e-11
>seq6977
Length=186913
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
||||| || ||||||||||| || |||| | || | |||| |||| ||| |||||
Sbjct 62508 GTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTGCTTACCG 62449
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
|| ||||||| | || || || ||| | ||| || ||||| ||| || |||
Sbjct 62448 GCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTG 62389
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCG-TTTCGACGGTAATGGTTTTACCTGTTAAAGT 19023
|| | ||| ||||| | ||||| || ||||| ||| ||||| || || || | ||
Sbjct 62388 ACGTTTTCGATGGTATC-CGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGGGT 62330
Query 19024 TTTGACAAAAATTTGCAT 19041
||||| |||||||||||
Sbjct 62329 CTTGACGAAAATTTGCAT 62312
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||| | || || ||||||||||||||||| || | || || |||| ||
Sbjct 61408 CACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTC 61349
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|| |||||| || ||| | ||||| | |||||| || || | ||| || || ||
Sbjct 61348 CAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTG 61289
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|||||| ||||| | | | || || || || ||| | ||| || || ||
Sbjct 61288 AATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTCTT 61229
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| |||| |||||| |||||||| |||||
Sbjct 61228 ACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409637944982830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |