Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 100 2e-16
>seq6977
Length=186913
Score = 100 bits (110), Expect = 2e-16
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || || | |||||| || | ||||| |||||||| || ||||| || ||
Sbjct 62311 ACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 62252
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| || | ||| || | ||||| || || || | ||| || ||||| | |||
Sbjct 62251 CAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192
Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||||||||| || || | ||| || || | | |||||| || || ||
Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCC---TTCACATTCTCAATCGTATCCGAGGCTTC 62135
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || ||||| ||||| || || || || ||||| |||||||| ||||||
Sbjct 62134 CACTTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083
Score = 91.5 bits (100), Expect = 9e-14
Identities = 160/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
|||||| | | || | ||| | ||| | || || ||||| || ||||||||||||||
Sbjct 60970 ACCGCCACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGA 60911
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| | || ||| |||| |||||| ||| ||| || | ||| |||||||| | |||
Sbjct 60910 GAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGG 60851
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|||||||| || || | | | ||| || || | | ||| ||||| || ||
Sbjct 60850 AATGCCTTCCTTGTCCTGGATCTTAGCC---TTCACGTTCTCAATGGTGTCAGAGGCTTC 60794
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||| || || || || || || || || || ||||| ||||| || ||||||
Sbjct 60793 AACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCATG 60742
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| || || || || |||||||||||||||| | || | ||| ||||||||||| ||
Sbjct 61623 GTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTGCTTGCCG 61564
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGT 33289
||| || | ||| |||||||| | || || ||||| || || | | | |||
Sbjct 61563 GCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTTGCC--- 61507
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || ||| ||| ||||| | | || ||||| || || || || || || ||
Sbjct 61506 TTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGTGAGG 61447
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || |||||||||||||||
Sbjct 61446 GTCTTAACGAAAATTTGCATG 61426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314983040302110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |