Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 86.0 5e-12
>seq6977
Length=186913
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
||||| || | ||| | || | ||| || || ||||| || || || |||||||| |
Sbjct 61653 CCTCCACGAAGCCTGAGGACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGAC 61594
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | ||||||||||| ||||| ||| ||||||| | ||| || ||| ||
Sbjct 61593 AGAGTGCGACCGTCTTCCAATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGG 61534
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || ||| ||||| | ||| | || || || |
Sbjct 61533 ATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACT 61474
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| |||||| || |||||||| | || || || |||||||||||
Sbjct 61473 TCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTAACGAAAATTTGCAT 61427
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058
|||||| || || || ||||||||||| |||||||| || || || |||||
Sbjct 62293 CACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTC 62234
Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118
| || || || || | || || | |||||| ||| ||| | ||||||||||||
Sbjct 62233 AAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTG 62174
Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGG-TTCCGTTTCCACGGTAATGGTTT 20177
|||||| ||||| | ||| | ||| | ||| |||| ||| | ||||| || |
Sbjct 62173 AATTTTAGCCTTCACATTCTCAATCGTATC-CGAGGCTTCCACTTCAAGAGTAATCGTCT 62115
Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||||||| ||||| || ||||| |||||
Sbjct 62114 TGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414592656221295
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |