Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6977 91.5 1e-13 >seq6977 Length=186913 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| | || ||| || ||||| || || |||||||||||||| || | Sbjct 62311 ACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 62252 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || |||||||||||| || | || | |||||| || || || Sbjct 62251 CAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||| |||||| |||||| ||| | | | | || ||||| | | ||| Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCAC 62132 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || ||||| || |||||||| ||||||||||| Sbjct 62131 TTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| ||| ||||||||||| ||||| |||| || || |||| || Sbjct 61408 CACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTC 61349 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || ||| || || | | || | ||||||||| || || | | |||||| || Sbjct 61348 CAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTG 61289 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCT-CGACTGTTATGGTTT 48695 |||||| ||| | | | | ||||| || | || || || || | | || || || | Sbjct 61288 AATTTTAGCCTTTACATTCTCAATGGTGTCTGAAG-CTTCGACTTCCAAGGTGATTGTCT 61230 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| |||||||| |||||||||||||| Sbjct 61229 TACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | | ||| || || || ||| ||||||||| || ||||| || | Sbjct 62767 ACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGA 62708 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | || || |||||||| ||| || | || | |||||||||||| || Sbjct 62707 CAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGG 62648 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||| ||| || || ||| | | ||||||| || | || || || Sbjct 62647 AATACCTTCCTTATCCTGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAG-CTTCGA 62589 Query 48679 C-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | |||| || ||||| || || ||||| ||||| || || || ||||| Sbjct 62588 CTTCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416236848846695