Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 91.5 1e-13
>seq6977
Length=186913
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| | || ||| || ||||| || || |||||||||||||| || |
Sbjct 62311 ACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 62252
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || |||||||||||| || | || | |||||| || || ||
Sbjct 62251 CAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||| |||||| |||||| ||| | | | | || ||||| | | |||
Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCAC 62132
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || || || || ||||| || |||||||| |||||||||||
Sbjct 62131 TTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || ||||| ||| ||||||||||| ||||| |||| || || |||| ||
Sbjct 61408 CACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTC 61349
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| ||| || || | | || | ||||||||| || || | | |||||| ||
Sbjct 61348 CAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTG 61289
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCT-CGACTGTTATGGTTT 48695
|||||| ||| | | | | ||||| || | || || || || | | || || || |
Sbjct 61288 AATTTTAGCCTTTACATTCTCAATGGTGTCTGAAG-CTTCGACTTCCAAGGTGATTGTCT 61230
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||||| |||||||| ||||||||||||||
Sbjct 61229 TACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| |||| | | ||| || || || ||| ||||||||| || ||||| || |
Sbjct 62767 ACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGA 62708
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | || || |||||||| ||| || | || | |||||||||||| ||
Sbjct 62707 CAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGG 62648
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||| ||| || || ||| | | ||||||| || | || || ||
Sbjct 62647 AATACCTTCCTTATCCTGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAG-CTTCGA 62589
Query 48679 C-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| |||| || ||||| || || ||||| ||||| || || || |||||
Sbjct 62588 CTTCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 416236848846695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |