Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq3499 113 9e-21 >seq3499 Length=768222 Score = 113 bits (124), Expect = 9e-21 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 4472 ATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAG 4531 ||||| | || ||||| || || | ||| || |||||||| |||| | |||||| Sbjct 182433 ATAAAGAAAAATATGTAATACATCACAAAGCGTTACAACAATGTACAGATCTCGGTTTAA 182374 Query 4532 TTCTTAAGAAAATACACCTAG---TCTTGAAATTTGAGCAATCAGACTGGCTCAAATCAT 4588 | | | || || ||| ||| ||| || || ||||||| ||| | ||| ||| Sbjct 182373 AGTTAACTGAGATCCA--TAGGGTTCTAGAATTTGCAG-AATCAGAATGGATGAAACCAT 182317 Query 4589 ATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTT 4648 ||||||||| ||| || | | ||||| |||| | ||||| || |||||| |||| | Sbjct 182316 ATATCGATATAAACACAGAAAAGAGAAAATTAGCAACAAATGATTTTGAAAAAGACTTCT 182257 Query 4649 ATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700 ||||||| ||||||||||| |||| |||||| || ||||| || || |||| Sbjct 182256 ATAAATTGATGAATAATGCAGTTTATGGAAAAACAATGGAAAACATAAGAAA 182205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96838068109030