Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6977 116 3e-21 seq15119 82.4 7e-11 >seq6977 Length=186913 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| || | |||||| ||||| | ||| | Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | |||||| ||||||| ||||| ||||| || || ||||| ||| Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAA 62431 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| || ||| || || | ||||| | | | | |||||||| Sbjct 62432 CAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAAT 62491 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| ||||||| ||||| || ||| | || || Sbjct 62492 ATTCAAAAAGAATCTACCCTCCATCTTGTCCTCAGGCTTCGTGGTGG 62538 >seq15119 Length=58442 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 71716 TGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGAC 71775 |||||||||||| ||||| | | | |||||||||||||| || || || || || ||||| Sbjct 57295 TGAGGGTAAAATGCACGGCTTCTTGCGCATGTACTGGGCTAAGAAAATACTAGAATGGAC 57236 Query 71776 TCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGA 71835 | | |||||| || || | ||| | ||||| || ||||| || ||| || || Sbjct 57235 CCCAGATCCCGACACCGCCCTGGCGTACGCCATTTACCTCAACGACAGGTACTCGCTGGA 57176 Query 71836 CGGTCGCGATCCTAACGG 71853 ||||| || || ||||| Sbjct 57175 TGGTCGTGACCCCAACGG 57158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472818560340400