Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 114 1e-20
>seq6977
Length=186913
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| | || || || ||||||| | ||||| || |||
Sbjct 62084 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTCG 62143
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || ||| | || || || ||| |||||||||||||| || ||||| |||
Sbjct 62144 GATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCAA 62203
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTATA 24168
||| | ||||| | || ||| ||||| || ||||| | | | | | |||| || || |
Sbjct 62204 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCA--GACTACA 62261
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||||| || |||| || ||| || | |||||||| ||
Sbjct 62262 ACATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGG 62310
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | ||||| || | || ||| |||||||||| |||
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| |||||||| | |||||| ||||||| ||||| |||||||| || ||||| |||
Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAA 62431
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | || |||| || ||| ||||| | ||||| | | | | | || |||||
Sbjct 62432 CAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAAT 62491
Query 24171 ATTCAAAAAGAATCTAC 24187
|||||||||||||||||
Sbjct 62492 ATTCAAAAAGAATCTAC 62508
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| ||||||| || | || || ||||||| || |||
Sbjct 60743 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACGCTCGAAGTTGAAGCCTCT 60802
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| ||| | || || ||||| ||||| |||||||| || ||||| ||
Sbjct 60803 GACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 60862
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || || | | ||||||||||| || || | | | | || ||||| ||
Sbjct 60863 CAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGACGGACGTACCCTCTCTGATTACAAT 60922
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|| || ||||||||||| | ||| | |||
Sbjct 60923 ATCCAGAAAGAATCTACCCTCCATCTTGTG 60952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424818269587725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |