Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 154 1e-32
seq59859 140 2e-28
seq109245 136 3e-27
seq3637 96.9 2e-15
seq852895 95.1 8e-15
seq479639 95.1 8e-15
seq282893 91.5 1e-13
seq7324 91.5 1e-13
seq97593 89.7 3e-13
seq4196 89.7 3e-13
seq604089 82.4 5e-11
seq18692 82.4 5e-11
>seq6977
Length=186913
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||||||| | |||||| ||||| || || |||||||| ||||| || |
Sbjct 62312 TACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTG 62253
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| || |||| || | || || ||||| || || || || ||||| |||| ||
Sbjct 62252 ACAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGG 62193
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||||| |||||| ||||||||||| | ||||| ||| |
Sbjct 62192 GAATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCA 62133
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| | ||||| || || || |||| |||||||||||| |||||||||
Sbjct 62132 CTTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| |||| | ||||| |||||| ||||||||| ||||||||||||||||| ||||||
Sbjct 61425 CCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGAC 61366
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| ||| |||| || || ||||| || ||||| || || || || || || | ||
Sbjct 61365 AGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGA 61306
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||| || || |||||| ||| ||||||| | || ||| | ||| |||
Sbjct 61305 ATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACT 61246
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || ||||| || | ||||| || || ||||||||
Sbjct 61245 TCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
||| || ||| ||||| ||||||||||||||||||| | || |||| || |||||
Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTG 61571
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|| |||||||| || || || || || |||| |||| ||||| |||||| || ||
Sbjct 61570 CTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 61511
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
| ||||||||| | | || || | || ||||| | |||||||| || || ||
Sbjct 61510 TGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGT 61451
Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318
| ||| || ||||| || ||||||
Sbjct 61450 GAGGGTCTTAACGAAAATTTGCATG 61426
Score = 98.7 bits (108), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
|| || || |||||||||||||| | |||| |||| || | ||| || || |||||
Sbjct 60933 TCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAG 60874
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| || || || || |||| ||| | |||||| |||||| || || |||||| |||
Sbjct 60873 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTC 60814
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| | || || ||||||||| | || || || || || || | ||||||||||
Sbjct 60813 TCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACG 60754
Query 38307 AATATCTGCATG 38318
|| |||||||||
Sbjct 60753 AAGATCTGCATG 60742
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
|| ||||||||||| || || || | | || |||| || || || || ||||| ||
Sbjct 62502 TCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAA 62443
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| || |||||||| |||| ||| | |||||| |||||| ||| ||| || || ||
Sbjct 62442 ATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGACGTTT 62383
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || ||||| ||| ||||| | || || || || || || | ||| || |||
Sbjct 62382 TCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 62323
Query 38307 AATATCTGCAT 38317
|| || |||||
Sbjct 62322 AAAATTTGCAT 62312
>seq59859
Length=9336
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2763 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2822
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2823 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2857
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 4751 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 4810
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 4811 GCCAATATTTAGCTTTA 4827
>seq109245
Length=1363
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 530 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 589
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 590 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 624
>seq3637
Length=526517
Score = 96.9 bits (106), Expect = 2e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCC 6233
|||||||| |||| || | ||||| |||||||||||||| ||||| || ||||
Sbjct 283180 AACGTAAACCGTAGCGTCACTGACGCTTTCTACCGCTACAAGATGCCCAAGCTCGTCGCC 283121
Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293
|| || || || ||||| ||||| || || |||||||| ||||||||| ||| || ||
Sbjct 283120 AAAGTGGAAGGCAAGGGCAACGGCATCAAGACCGTCATCGTCAACATGGTTGATGTGGCC 283061
Query 6294 AAGGCGCTCGGACGCCCTGCCAC 6316
||||| | || |||| ||||
Sbjct 283060 AAGGCCATTGGGTGCCCACCCAC 283038
>seq852895
Length=355
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||| || |||||||||||||||||||| ||||||||||||| |||||||| |
Sbjct 29 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTCACTATCGGTTCTGT 88
Query 20007 GGTAATATTTAGCCTTA 20023
|| |||||||||||||
Sbjct 89 GGATATATTTAGCCTTA 105
>seq479639
Length=268
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||| || |||||||||||||||||||| ||||||||||||| |||||||| |
Sbjct 159 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTCACTATCGGTTCTGT 218
Query 20007 GGTAATATTTAGCCTTA 20023
|| |||||||||||||
Sbjct 219 GGATATATTTAGCCTTA 235
>seq282893
Length=390
Score = 91.5 bits (100), Expect = 1e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 19954 TTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATA 20013
|||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 2 TTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTTACTATCGGTCTCATGGTTATA 61
Query 20014 TTTAG 20018
|||||
Sbjct 62 TTTAG 66
>seq7324
Length=137157
Score = 91.5 bits (100), Expect = 1e-13
Identities = 78/95 (82%), Gaps = 6/95 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| || |||||||| |||||| ||| | ||| |||||||||| || |||||| |
Sbjct 248 AAGTCCATTCCCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAGTGGGAATCTCAT 189
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||||| ||||||||||| ||||||||||||||
Sbjct 188 TAATCCTT-CATGCGCGTCAATAATTAGATGACGA 155
>seq97593
Length=1658
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||| || |||||||||||||||||||| | ||||||||||| |||||||| |
Sbjct 1299 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTATGGTACTTGTTCACTATCGGTTCTGT 1240
Query 20007 GGTAATATTTAGCCTTA 20023
|| |||||||||||||
Sbjct 1239 GGATATATTTAGCCTTA 1223
>seq4196
Length=56364
Score = 89.7 bits (98), Expect = 3e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 38172 TGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATT 38231
|| || || ||||| || || | ||||| || | || | || ||||| || ||||
Sbjct 9838 TGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGAATT 9779
Query 38232 TTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCC 38291
|| || ||||| | || ||||||| | |||||||||| ||||| || ||||||
Sbjct 9778 TTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAATGGTCTTACCC 9719
Query 38292 GTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | ||||||||| ||||||||||||||
Sbjct 9718 GTGAGGGTTTTCACAAATATCTGCATGTT 9690
>seq604089
Length=247
Score = 82.4 bits (90), Expect = 5e-11
Identities = 75/95 (79%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| |||| |||| |||||| ||| | ||| |||||||||| || |||||| |
Sbjct 228 AAGTCCGTGTTCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAATGGGAATCTCAT 169
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||||||||||| || ||||||||
Sbjct 168 TAATCCATTCATGCGCGTCACTAGTTTGATGACGA 134
>seq18692
Length=54327
Score = 82.4 bits (90), Expect = 5e-11
Identities = 75/95 (79%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| |||| |||| |||||| ||| | ||| |||||||||| || |||||| |
Sbjct 45796 AAGTCCGTGTTCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAATGGGAATCTCAT 45855
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||||||||||| || ||||||||
Sbjct 45856 TAATCCATTCATGCGCGTCACTAGTTTGATGACGA 45890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330960165948545
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