Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6977 154 1e-32 seq59859 140 2e-28 seq109245 136 3e-27 seq3637 96.9 2e-15 seq852895 95.1 8e-15 seq479639 95.1 8e-15 seq282893 91.5 1e-13 seq7324 91.5 1e-13 seq97593 89.7 3e-13 seq4196 89.7 3e-13 seq604089 82.4 5e-11 seq18692 82.4 5e-11 >seq6977 Length=186913 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||||||| | |||||| ||||| || || |||||||| ||||| || | Sbjct 62312 TACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTG 62253 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| || |||| || | || || ||||| || || || || ||||| |||| || Sbjct 62252 ACAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGG 62193 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| |||||| ||||||||||| | ||||| ||| | Sbjct 62192 GAATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCA 62133 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| | ||||| || || || |||| |||||||||||| ||||||||| Sbjct 62132 CTTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || |||| | ||||| |||||| ||||||||| ||||||||||||||||| |||||| Sbjct 61425 CCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGAC 61366 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| |||| || || ||||| || ||||| || || || || || || | || Sbjct 61365 AGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGA 61306 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| || || |||||| ||| ||||||| | || ||| | ||| ||| Sbjct 61305 ATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACT 61246 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || ||||| || | ||||| || || |||||||| Sbjct 61245 TCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| || ||| ||||| ||||||||||||||||||| | || |||| || ||||| Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTG 61571 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || |||||||| || || || || || |||| |||| ||||| |||||| || || Sbjct 61570 CTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 61511 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 | ||||||||| | | || || | || ||||| | |||||||| || || || Sbjct 61510 TGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGT 61451 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 | ||| || ||||| || |||||| Sbjct 61450 GAGGGTCTTAACGAAAATTTGCATG 61426 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || || |||||||||||||| | |||| |||| || | ||| || || ||||| Sbjct 60933 TCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAG 60874 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || || || || |||| ||| | |||||| |||||| || || |||||| ||| Sbjct 60873 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTC 60814 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | || || ||||||||| | || || || || || || | |||||||||| Sbjct 60813 TCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACG 60754 Query 38307 AATATCTGCATG 38318 || ||||||||| Sbjct 60753 AAGATCTGCATG 60742 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || ||||||||||| || || || | | || |||| || || || || ||||| || Sbjct 62502 TCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAA 62443 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || |||||||| |||| ||| | |||||| |||||| ||| ||| || || || Sbjct 62442 ATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGACGTTT 62383 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || ||||| ||| ||||| | || || || || || || | ||| || ||| Sbjct 62382 TCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 62323 Query 38307 AATATCTGCAT 38317 || || ||||| Sbjct 62322 AAAATTTGCAT 62312 >seq59859 Length=9336 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2763 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2822 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2823 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2857 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 4751 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 4810 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 4811 GCCAATATTTAGCTTTA 4827 >seq109245 Length=1363 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 530 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 589 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 590 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 624 >seq3637 Length=526517 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCC 6233 |||||||| |||| || | ||||| |||||||||||||| ||||| || |||| Sbjct 283180 AACGTAAACCGTAGCGTCACTGACGCTTTCTACCGCTACAAGATGCCCAAGCTCGTCGCC 283121 Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293 || || || || ||||| ||||| || || |||||||| ||||||||| ||| || || Sbjct 283120 AAAGTGGAAGGCAAGGGCAACGGCATCAAGACCGTCATCGTCAACATGGTTGATGTGGCC 283061 Query 6294 AAGGCGCTCGGACGCCCTGCCAC 6316 ||||| | || |||| |||| Sbjct 283060 AAGGCCATTGGGTGCCCACCCAC 283038 >seq852895 Length=355 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| || |||||||||||||||||||| ||||||||||||| |||||||| | Sbjct 29 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTCACTATCGGTTCTGT 88 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 89 GGATATATTTAGCCTTA 105 >seq479639 Length=268 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| || |||||||||||||||||||| ||||||||||||| |||||||| | Sbjct 159 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTCACTATCGGTTCTGT 218 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 219 GGATATATTTAGCCTTA 235 >seq282893 Length=390 Score = 91.5 bits (100), Expect = 1e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 19954 TTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATA 20013 |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| Sbjct 2 TTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTTACTATCGGTCTCATGGTTATA 61 Query 20014 TTTAG 20018 ||||| Sbjct 62 TTTAG 66 >seq7324 Length=137157 Score = 91.5 bits (100), Expect = 1e-13 Identities = 78/95 (82%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| || |||||||| |||||| ||| | ||| |||||||||| || |||||| | Sbjct 248 AAGTCCATTCCCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAGTGGGAATCTCAT 189 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||| ||||||||||| |||||||||||||| Sbjct 188 TAATCCTT-CATGCGCGTCAATAATTAGATGACGA 155 >seq97593 Length=1658 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| || |||||||||||||||||||| | ||||||||||| |||||||| | Sbjct 1299 CTCTCTCTCCAGAGTTCTTTTCAACTTTCCCTTATGGTACTTGTTCACTATCGGTTCTGT 1240 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 1239 GGATATATTTAGCCTTA 1223 >seq4196 Length=56364 Score = 89.7 bits (98), Expect = 3e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 38172 TGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATT 38231 || || || ||||| || || | ||||| || | || | || ||||| || |||| Sbjct 9838 TGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGAATT 9779 Query 38232 TTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCC 38291 || || ||||| | || ||||||| | |||||||||| ||||| || |||||| Sbjct 9778 TTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAATGGTCTTACCC 9719 Query 38292 GTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | ||||||||| |||||||||||||| Sbjct 9718 GTGAGGGTTTTCACAAATATCTGCATGTT 9690 >seq604089 Length=247 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| |||| |||| |||||| ||| | ||| |||||||||| || |||||| | Sbjct 228 AAGTCCGTGTTCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAATGGGAATCTCAT 169 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| || |||||||| Sbjct 168 TAATCCATTCATGCGCGTCACTAGTTTGATGACGA 134 >seq18692 Length=54327 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| |||| |||| |||||| ||| | ||| |||||||||| || |||||| | Sbjct 45796 AAGTCCGTGTTCTTGCCTGTGGGTTCACCAGAATGTAGATAGGGACAATGGGAATCTCAT 45855 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| || |||||||| Sbjct 45856 TAATCCATTCATGCGCGTCACTAGTTTGATGACGA 45890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330960165948545