Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq763459 116 4e-21 seq17437 116 4e-21 seq14863 116 4e-21 seq7102 116 4e-21 seq671835 111 2e-19 seq9157 109 6e-19 seq8016 107 2e-18 seq7011 89.7 6e-13 >seq763459 Length=675 Score = 116 bits (128), Expect = 4e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--G 126321 ||||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| | Sbjct 115 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTG 56 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||||| Sbjct 55 CGTGGGTTCGAACCCCACACCTGACA 30 >seq17437 Length=68110 Score = 116 bits (128), Expect = 4e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GCG 126323 ||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| ||| Sbjct 46243 GTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTGCG 46302 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 46303 TGGGTTCGAACCCCACACCTGACAAA 46328 >seq14863 Length=77577 Score = 116 bits (128), Expect = 4e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--G 126321 ||||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| | Sbjct 66694 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTG 66635 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||||| Sbjct 66634 CGTGGGTTCGAACCCCACACCTGACA 66609 >seq7102 Length=235508 Score = 116 bits (128), Expect = 4e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--G 126321 ||||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| | Sbjct 158504 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTG 158563 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||||| Sbjct 158564 CGTGGGTTCGAACCCCACACCTGACA 158589 >seq671835 Length=907 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC--GGGAG 126321 ||||||||||||||||||||||||||||| |||||||||| |||| | | ||| | | | Sbjct 823 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAAGAGTG 882 Query 126322 CGTGGGTTCGAACCCCACACCTGAC 126346 ||||||||||||||||||||||||| Sbjct 883 CGTGGGTTCGAACCCCACACCTGAC 907 >seq9157 Length=148631 Score = 109 bits (120), Expect = 6e-19 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGC 126322 |||||||||||||||||||||||||||| |||||||||| |||| | || | | | || Sbjct 85171 AGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCGCAAGAGTGC 85112 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 85111 GTGGGTTCGAACCCCACACCTGACAAA 85085 >seq8016 Length=104547 Score = 107 bits (118), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGCG 126323 ||||||||||||||||||||||||||| |||||||||| |||| | || | | | ||| Sbjct 7002 GTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCGCAAGAGTGCG 6943 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 6942 TGGGTTCGAACCCCACACCTGACAAA 6917 >seq7011 Length=120798 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 |||||||| | ||| ||||||||||| || | || ||||| || || || | ||| ||| Sbjct 27064 TTGTACATAAGGCAGGCAAAGTCGGTGTGGAGCCCCTCGTCCCGGGAGATAAGCTCGTTG 27005 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||||| || | || || | ||| || || ||||| ||||| || || || || || Sbjct 27004 CTGAAGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAC 26945 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || || ||||| || || || || || ||||| || | || || || ||| | |||| Sbjct 26944 CCGGAGAAAAAGATTCCCTCAACTGCGGCAAAGGCGATGATCCGCTCCGCATAGCTTGCA 26885 Query 93260 GA 93261 || Sbjct 26884 GA 26883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550062260511800