Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 150 1e-31
seq4196 98.7 8e-16
seq23011 96.9 3e-15
>seq6977
Length=186913
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || ||||| | ||||| || ||| | ||||||||||||||| || |
Sbjct 62084 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTCG 62143
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || |||||||| ||||| || || ||||| ||||| |||
Sbjct 62144 GATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCAA 62203
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || ||||| || ||| | || || ||||||| | || || ||||||
Sbjct 62204 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAAC 62263
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| ||| | || || || | || ||| | || |||
Sbjct 62264 ATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGGT 62311
Score = 145 bits (160), Expect = 6e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||||||||||||| |||||||||| || |||| | ||||| ||| | |
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || ||||||||||| ||||| || ||||| || || ||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| ||||||||||| || || || ||| | || || |||||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||||| |||||||| | || || || ||||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCTGCG 61413
Score = 143 bits (158), Expect = 2e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || || || || |||| || ||||| ||| || |
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | ||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAA 62431
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| || ||||| || ||||| || || |||||| | || || || ||
Sbjct 62432 CAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAAT 62491
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
|||||||||||||| ||| | |||
Sbjct 62492 ATTCAAAAAGAATCTACCCTCCAT 62515
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| ||||| |||| ||||| || || || |
Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||| || || || ||||| |||||||| ||||| ||
Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAG 63115
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||||||| | || ||| ||||||| | || || |||||
Sbjct 63116 CAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAT 63175
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || ||||| | ||||| ||| ||||| | ||||| ||
Sbjct 63176 ATCCAGAAGGAGTCCACTCTCCATTTGGTTCTGCGACTCCGCGGTGG 63222
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| |||||||| || || |
Sbjct 60971 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTCGAGGCCTCT 61030
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || || || || ||||| |||||||| ||||| |||
Sbjct 61031 GATACTATTGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAA 61090
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| || |||||||| ||| | || ||| |||||| | || || |||||
Sbjct 61091 CAGCGTCTTATTTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACACTTTCGGACTACAAT 61150
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || |||||||||||| | ||| | || | || |||| || |||
Sbjct 61151 ATCCAGAAAGAATCCACCCTTCATCTCGTGCTCAGACTGCGTGGTGGT 61198
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || || |||| || ||||| || | |
Sbjct 61655 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACAATCACCCTGGAAGTCGAGGCTTCG 61714
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || ||| || || || ||||| |||||||| ||||| |||
Sbjct 61715 GACACCATTGAAAACGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAA 61774
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| || |||||||| ||| | || ||| || || | || || |||||
Sbjct 61775 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAAT 61834
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || |||||| | || || || |||| |||| ||||||
Sbjct 61835 ATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGT 61882
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||| || | ||||| || || | || || ||||| || | |
Sbjct 61427 ATGCAAATTTTCGTTAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTAGAGGCTTCG 61486
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || ||| || || |||||||| || || || ||||| ||
Sbjct 61487 GACACCATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 61546
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||||||||| || || || || ||||| | || ||||||||
Sbjct 61547 CAGCGTCTTATTTTTGCCGGCAAGCAATTGGAAGACGGTCGCACTCTGTCTGATTACAAT 61606
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
||||| || ||||||||| | |||
Sbjct 61607 ATTCAGAAGGAATCCACCCTCCAT 61630
>seq4196
Length=56364
Score = 98.7 bits (108), Expect = 8e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || ||||| ||||| | || ||||| || | || || ||||| || |
Sbjct 9690 AACATGCAGATATTTGTGAAAACCCTCACGGGTAAGACCATTACCCTAGAAGTTGAGGCT 9749
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || ||||| ||||||||||| || |||||||||||||| ||
Sbjct 9750 TCAGATACTATCGAAAATGTCAAATCCAAAATTCAAGATAAAGAGGGTATTCCACCTGAC 9809
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374
||||| | ||||| ||||| ||||| ||| | || |||
Sbjct 9810 CAACAGAGGCTTATTTTTGCTGGCAAGCAGCTTGAAGAT 9848
>seq23011
Length=82770
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || || || ||||| | || || || || |||| ||||| ||||| |
Sbjct 77724 AGATGCAGATCTTCGTGAAAACACTCACGGGGAAGACCATCACCCTTGAGGTGGAGGCTT 77665
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| |||||| | || || | ||| || || ||||||||||| |||||||| || ||||
Sbjct 77664 CTGATACCATTGAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCTGATC 77605
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374
|||| || ||||| ||||| || || ||| | || |||
Sbjct 77604 AACAGCGACTTATCTTTGCAGGAAAGCAGCTCGAAGAT 77567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414731780212675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |