Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6977 140 3e-28 >seq6977 Length=186913 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || || | || || || || | || ||||| |||||||| ||||| || Sbjct 61428 ATGCCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCA 61369 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||||| | ||||| ||||| |||| |||||||| ||||| ||| Sbjct 61368 GACAGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGA 61309 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||| || |||| | |||| |||||| | | |||| Sbjct 61308 GGAATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCG 61249 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || ||||| |||||||| |||||||||||||| Sbjct 61248 ACTTCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || || | || | ||| | || |||||||| || || |||||||| Sbjct 62997 ATACCGCCACGCAGCCTAAGCACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCA 62938 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || ||||| ||||| ||||||||||||| ||||| || Sbjct 62937 GAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 62878 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | |||| |||||| | || |||| Sbjct 62877 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCG 62818 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| ||||| ||||| || ||||||||||| Sbjct 62817 ACTTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||||||||||||||| || || || || |||||||| || ||||| Sbjct 62280 GTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTCAAGCTGCTTACCG 62221 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||||||||| || ||||||||||||||||| ||| || || Sbjct 62220 GCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTC 62161 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | || ||| || || | || | ||| ||||||||||| ||| Sbjct 62160 ACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGCCGGTCAGGGTT 62101 Query 114366 TTTACAAAAATCTGCATG 114383 || || |||||||||||| Sbjct 62100 TTCACGAAAATCTGCATG 62083 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || || | || | ||| | ||||||||||| || || |||||||| Sbjct 60972 ATACCGCCACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCA 60913 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| || || ||||| || ||||| ||||||||||||| ||||| || Sbjct 60912 GAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 60853 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | |||| |||||| | || ||| Sbjct 60852 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCA 60793 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || ||||| || || ||||| || || ||||||||| Sbjct 60792 ACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCATG 60742 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || | ||| | ||||||||||||||||| || || || Sbjct 62541 ATACCACCACGAAGCCTGAGGACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCC 62482 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||| | || ||||| ||| | || ||||| |||||||| || Sbjct 62481 GATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGG 62422 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||||| ||| | | ||| | ||| || | || |||| Sbjct 62421 GGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCG 62362 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || || ||||| ||||| Sbjct 62361 ACTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 62312 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || || || | || || || || | || || || ||||| || ||||| || Sbjct 61883 TACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTG 61824 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || ||||||| ||||||||| || || || ||| |||| |||||||||||||| || | Sbjct 61823 ACAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGG 61764 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||| ||||| || || |||||| || | | ||||| |||||| | | |||| Sbjct 61763 GAATACCTTCCTTATCCTGGATCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGA 61704 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| ||| | || || ||||| || || || || ||||| ||||| Sbjct 61703 CTTCCAGGGTGATTGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || |||| || ||| ||||| | || || || || || || ||||| || Sbjct 63222 CCACCGCGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 63163 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || |||||| || ||||| || || ||||||||||||| ||||| || ||| Sbjct 63162 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 63103 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| || || |||||| || | | ||||| || || | || ||||| Sbjct 63102 ATACCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACC 63043 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||||||||| || || || || || |||||||| Sbjct 63042 TCAAGGGTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 102 bits (112), Expect = 7e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| ||||| | || | || | ||||| || ||||| || |||||||| Sbjct 62085 ATGCCACCACGCAGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCA 62026 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||| || ||||| ||||| ||||||||||||| ||||| || Sbjct 62025 GAGAGGGTACGACCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 61966 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | |||| |||||| | || |||| Sbjct 61965 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCG 61906 Query 114333 A 114333 | Sbjct 61905 A 61905 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| ||||| | || | ||| | || |||||||| || || ||||| || Sbjct 61200 ATACCACCACGCAGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCC 61141 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || || ||| | || |||||||||||||| || Sbjct 61140 GAAAGTGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGG 61081 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || ||||| || | | ||||| || || | || ||| Sbjct 61080 GGAATACCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCG 61021 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || || || || || |||||||| Sbjct 61020 ACTTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415133342642340