Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 140 3e-28
>seq6977
Length=186913
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| ||||| || || | || || || || | || ||||| |||||||| ||||| ||
Sbjct 61428 ATGCCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCA 61369
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| ||||| | ||||| ||||| |||| |||||||| ||||| |||
Sbjct 61368 GACAGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGA 61309
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || ||| || |||| | |||| |||||| | | ||||
Sbjct 61308 GGAATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCG 61249
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || ||||| |||||||| ||||||||||||||
Sbjct 61248 ACTTCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || || | || | ||| | || |||||||| || || ||||||||
Sbjct 62997 ATACCGCCACGCAGCCTAAGCACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCA 62938
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || ||||| ||||| ||||||||||||| ||||| ||
Sbjct 62937 GAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 62878
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| || | | |||| |||||| | || ||||
Sbjct 62877 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCG 62818
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || ||||| ||||| ||||| || |||||||||||
Sbjct 62817 ACTTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768
Score = 136 bits (150), Expect = 3e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||||||||||||||| || || || || |||||||| || |||||
Sbjct 62280 GTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTCAAGCTGCTTACCG 62221
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| |||||||||||||| || ||||||||||||||||| ||| || ||
Sbjct 62220 GCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTC 62161
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| || || | || ||| || || | || | ||| ||||||||||| |||
Sbjct 62160 ACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGCCGGTCAGGGTT 62101
Query 114366 TTTACAAAAATCTGCATG 114383
|| || ||||||||||||
Sbjct 62100 TTCACGAAAATCTGCATG 62083
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || || | || | ||| | ||||||||||| || || ||||||||
Sbjct 60972 ATACCGCCACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCA 60913
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| || || ||||| || ||||| ||||||||||||| ||||| ||
Sbjct 60912 GAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 60853
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| || | | |||| |||||| | || |||
Sbjct 60852 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCA 60793
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | || | || ||||| || || ||||| || || |||||||||
Sbjct 60792 ACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCATG 60742
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | || | ||| | ||||||||||||||||| || || ||
Sbjct 62541 ATACCACCACGAAGCCTGAGGACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCC 62482
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||| | || ||||| ||| | || ||||| |||||||| ||
Sbjct 62481 GATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGG 62422
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||||| ||| | | ||| | ||| || | || ||||
Sbjct 62421 GGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCG 62362
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || ||||| || || || || || ||||| |||||
Sbjct 62361 ACTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 62312
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| || || || | || || || || | || || || ||||| || ||||| ||
Sbjct 61883 TACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTG 61824
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
|| ||||||| ||||||||| || || || ||| |||| |||||||||||||| || |
Sbjct 61823 ACAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGG 61764
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||| ||||| || || |||||| || | | ||||| |||||| | | ||||
Sbjct 61763 GAATACCTTCCTTATCCTGGATCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGA 61704
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| |||| ||| | || || ||||| || || || || ||||| |||||
Sbjct 61703 CTTCCAGGGTGATTGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| || || |||| || ||| ||||| | || || || || || || ||||| ||
Sbjct 63222 CCACCGCGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 63163
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || || |||||| || ||||| || || ||||||||||||| ||||| || |||
Sbjct 63162 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 63103
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| || || |||||| || | | ||||| || || | || |||||
Sbjct 63102 ATACCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACC 63043
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||||||||||| || || || || || ||||||||
Sbjct 63042 TCAAGGGTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996
Score = 102 bits (112), Expect = 7e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| ||||| | || | || | ||||| || ||||| || ||||||||
Sbjct 62085 ATGCCACCACGCAGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCA 62026
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| |||||| || ||||| ||||| ||||||||||||| ||||| ||
Sbjct 62025 GAGAGGGTACGACCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGG 61966
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| || | | |||| |||||| | || ||||
Sbjct 61965 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCG 61906
Query 114333 A 114333
|
Sbjct 61905 A 61905
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| ||||| | || | ||| | || |||||||| || || ||||| ||
Sbjct 61200 ATACCACCACGCAGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCC 61141
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || || || ||| | || |||||||||||||| ||
Sbjct 61140 GAAAGTGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGG 61081
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| || || ||||| || | | ||||| || || | || |||
Sbjct 61080 GGAATACCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCG 61021
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| || || || || || ||||||||
Sbjct 61020 ACTTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415133342642340
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