Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq64647 96.9 8e-15 >seq64647 Length=8232 Score = 96.9 bits (106), Expect = 8e-15 Identities = 273/410 (67%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295 |||| || || ||| |||||||| | |||| || || ||| || || || || Sbjct 8232 TTGTTGACAATATCTCGCGGATTGTAGTTCTGGATTTTGGTGCTCCAGCCAGTGCCAATG 8173 Query 297296 CCACTCGAA-CCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGAT 297354 || |||| ||||| || |||| | || || |||||||| |||||||| || ||||| Sbjct 8172 CC-CTCGGCGCCATTGACAAGAACCATTGGGATGACAGGCACGTAATACTCGGGCTCGAT 8114 Query 297355 CTTGTCACCGTCATCATACAGATATTTCAGAAGA---TTATCGTCCGTATCGACGAAAAC 297411 || | | ||| || | || ||| || |||||| ||||| | | || || ||| Sbjct 8113 TTTTTGATTGTCTTCGTTCAAATAGTTGAGAAGAGGGTTATCTTGAGGATGGA---AAAT 8057 Query 297412 CTGTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACC 297471 || ||| |||| ||| || |||||||| || || | |||||| || || || Sbjct 8056 GTGGTGAGCGAGAGGAGACAGCTTGGTGAAAATGTAACGAGAACTCGCAGAGTCTTTTCC 7997 Query 297472 ACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCC 297531 ||| | | || ||||||||| || ||| || ||||||||| ||| || Sbjct 7996 GCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTGTTGGAGCC 7937 Query 297532 GACATAATCCTGTGCAAGGTTCACGATGGTCC-CTTGCAGAGATGCTTCGCCATGGTGAT 297590 || | | ||| || ||||| || || || | || || || |||| || ||||||| Sbjct 7936 AACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATG-AGGGACACTTCACCGTGGTGAT 7878 Query 297591 AGGCGCTATGCTCTGCAACG-TAACCGCTGAACTGTGCAACCTTCACGTC 297639 ||||| | || ||||||| | | |||| | ||| || || ||||| || Sbjct 7877 AGGCGGTGTGTTCTGCAATGCTGCCCGC-CAGCTGAGCCACTTTCACCTC 7829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1089078664798250