Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6977 181 1e-40 seq4196 96.9 3e-15 seq3070 86.0 6e-12 >seq6977 Length=186913 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| | ||||| | |||| ||||||||||||||||||||||| |||| Sbjct 62311 ACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 62252 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||||||||||||||| ||||| | || || ||||| |||||||| || Sbjct 62251 CAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| || || ||||| ||| ||| ||| | ||||| ||| ||||| Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCAC 62132 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||||||||||| ||||| |||||||| ||||| Sbjct 62131 TTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| |||||||| ||||| | ||||||||||| || || |||||||| | Sbjct 62995 ACCGCCACGCAGCCTAAGCACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGA 62936 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| ||||| ||||| ||| | ||||| |||||||||||||| || Sbjct 62935 GAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGG 62876 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || ||| | || || ||| || || Sbjct 62875 AATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGAC 62816 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| |||| ||||| |||||||| ||||| Sbjct 62815 TTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| |||||||| ||||| | || |||||||| || || |||||||| | Sbjct 60970 ACCGCCACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGA 60911 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || |||| || || |||||||| ||| | ||||| |||||||||||||| || Sbjct 60910 GAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGG 60851 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || ||| | || ||| ||| || || Sbjct 60850 AATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAAC 60791 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| || | ||||| ||||| || ||||| Sbjct 60790 TTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCAT 60743 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| ||||| ||||||| || |||||||| || || ||||| || | Sbjct 61198 ACCACCACGCAGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGA 61139 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| |||||||||||||| |||| || ||||| |||||||| || Sbjct 61138 AAGTGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGG 61079 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| ||| || | |||||| ||| || || Sbjct 61078 AATACCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCGAC 61019 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||||||||| | || || ||||| || ||||| Sbjct 61018 TTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || ||||| || ||||| |||||||| | Sbjct 61654 ACCTCCACGAAGCCTGAGGACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGA 61595 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| | |||||||||||| |||| || ||||||||||||||||| Sbjct 61594 CAGAGTGCGACCGTCTTCCAATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGG 61535 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || || || || ||| ||| ||| || | || || || || || Sbjct 61534 GATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTAC 61475 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||||| | || || |||||||||||||| Sbjct 61474 TTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTAACGAAAATTTGCAT 61427 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | |||| || ||||| |||||||| ||||| || | | ||| || ||||| Sbjct 61410 AGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCT 61351 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| ||||| ||| | || || ||||||||||| |||||||| ||||| || ||| Sbjct 61350 TCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCT 61291 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||||||| ||| | || || || || ||||| | || | ||| Sbjct 61290 TGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTC 61231 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | |||||| || ||||| ||||| Sbjct 61230 TTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| | || | || || || ||||| || ||||| |||| Sbjct 62767 ACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGA 62708 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | |||||||||||||||||||| | || || |||||||| ||||| || Sbjct 62707 CAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGG 62648 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || ||| ||||||| || | || || || || || Sbjct 62647 AATACCTTCCTTATCCTGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGAC 62588 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| || | ||||||||||| |||||||| Sbjct 62587 TTCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || |||||||||||||| || || || | Sbjct 62539 ACCACCACGAAGCCTGAGGACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGA 62480 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| | |||||| ||||| |||| || || || |||||||| || Sbjct 62479 TAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGG 62420 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| ||||| || || || || ||| ||||| || || | ||||| ||| || | Sbjct 62419 AATGCCTTCCTTGTCCTGAATCTTT-GCTTTGACGTTTTCGATGGTATCCGAGGCTTCGA 62361 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | ||||||||| || | || || |||||||||||||| Sbjct 62360 CTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 62312 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | || || || | ||| | || || || || || || ||||| || | Sbjct 63222 CCACCGCGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 63163 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | ||||| ||||| ||||||||| | ||||| |||||||||||||| ||| Sbjct 63162 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 63103 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || || || || ||| ||| ||| || | ||||| ||| || || Sbjct 63102 ATACCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACC 63043 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | || |||||||| | || || ||||| || ||||| Sbjct 63042 TCAAGGGTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| | || | || || || ||||| || ||||| |||| Sbjct 61882 ACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGA 61823 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | |||||||||||||||||||| | || || ||||| |||||||| || Sbjct 61822 CAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGG 61763 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || ||| ||| || || | || || || || || Sbjct 61762 AATACCTTCCTTATCCTGGATCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGAC 61703 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||| ||||| | || || |||||||||||||| Sbjct 61702 TTCCAGGGTGATTGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655 Score = 105 bits (116), Expect = 7e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| ||| ||||| || || | || || || ||||| || |||||||| | | Sbjct 62082 CCACCACGCAGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAG 62023 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| ||||| ||||| ||| | ||||| |||||||||||||| ||| Sbjct 62022 AGGGTACGACCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGA 61963 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 || ||||| || || || || || Sbjct 61962 ATGCCTTCCTTGTCCTGGATCTT 61940 >seq4196 Length=56364 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||||||||||||||| ||| |||| |||| ||| ||||| || ||||| || ||||| Sbjct 9847 TCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTTTA 9788 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| ||||| || ||| || | ||||| || || ||||||| || | | Sbjct 9787 TCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAATG 9728 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || || | ||||| || || || ||||| || Sbjct 9727 GTCTTACCCGTGAGGGTTTTCACAAATATCTGCATGTT 9690 >seq3070 Length=111036 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 155354 GTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCAT 155413 ||||||||| |||||||| ||||| | ||| ||||| || || | ||||||||||| Sbjct 82126 GTTGTAAGTCTCGATGGCAGCGTCGAGGTCTTCGCCGTGGATGCCAACAGCCACGCGCAT 82067 Query 155414 CAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTAC 155465 ||||||||| || ||||||||||| ||||| |||||| |||||| Sbjct 82066 CAGCATGTGCTGGGGCCGCTCCGCAACCTTGCCGTCAATGCGCAGCAAGTAC 82015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493544792775800