Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq64647 96.9 4e-15
seq941051 95.1 1e-14
seq66313 95.1 1e-14
seq32741 87.8 2e-12
seq3070 87.8 2e-12
>seq64647
Length=8232
Score = 96.9 bits (106), Expect = 4e-15
Identities = 239/362 (66%), Gaps = 12/362 (3%)
Strand=Plus/Minus
Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807
|| |||||||| || |||| ||| || || ||||||||||| | |||| || |
Sbjct 8184 CCAGTGCCAATGCCCTCGGCGCCATTGACAAGAACCATTGGGATGACAGGCACGTAATAC 8125
Query 175808 TCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGGA 175867
|| || || || | || |||| |||||||||||| | |||| ||| |||
Sbjct 8124 TCGGGCTCGATTTTTTGATTGTCTTCGTTCAAATAGTTGAGAAGAGGGTTATCTTGAGGA 8065
Query 175868 TCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGA---C 175924
| || || | |||| | || || ||||| ||||| | |||| |
Sbjct 8064 TGGAAAATGTGGTGAGCGAGAGGAGACAGCTTGGTGAAAATGTAAC------GAGAACTC 8011
Query 175925 GCA---TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
||| ||||| || |||||||||||||| || || |||||| |||| || | |||
Sbjct 8010 GCAGAGTCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTG 7951
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACT 176041
|| ||||| ||||| | ||| | |||| |||||||| || | |||||| |||
Sbjct 7950 ATGTTGTTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATGAGGGACACT 7891
Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101
|||||||| || ||||| | | || || | |||||| ||| ||||| |||| |
Sbjct 7890 TCACCGTGGTGATAGGCGGTGTGTTCTGCAATGCTGCCCGCCAGCTGAGCCACTTTCACC 7831
Query 176102 TC 176103
||
Sbjct 7830 TC 7829
>seq941051
Length=452
Score = 95.1 bits (104), Expect = 1e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 176828 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTC 176887
|||||||| || ||||| | ||||||||||| ||| ||||| || ||||| ||||||
Sbjct 31 AGAGGGAAGACTCCGTATTTGTCACGACCAACAACACCAAGACCTGCTACTGCCAGGGTC 90
Query 176888 TTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 176924
|| || || || ||||| |||| ||||||||||||||
Sbjct 91 TTGGCTGAGTCTCCCTCTGTCAAGATGAGCGTACACT 127
>seq66313
Length=14204
Score = 95.1 bits (104), Expect = 1e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 176828 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTC 176887
|||||||| || ||||| | ||||||||||| ||| ||||| || ||||| ||||||
Sbjct 13768 AGAGGGAAGACTCCGTATTTGTCACGACCAACAACACCAAGACCTGCTACTGCCAGGGTC 13827
Query 176888 TTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 176924
|| || || || ||||| |||| ||||||||||||||
Sbjct 13828 TTGGCTGAGTCTCCCTCAGTCAAGATGAGCGTACACT 13864
>seq32741
Length=53758
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 175928 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 175987
||||| || |||||||||||||| || || |||||| |||| || | ||||| |||
Sbjct 39099 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 39158
Query 175988 TTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCG 176047
|| ||||| | ||| | |||| |||||||| ||| | ||||| |||||||||
Sbjct 39159 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTAGACATAAGGGACACTTCACCG 39218
Query 176048 TGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTC 176103
|| || ||||| | | || || | |||||| ||| ||||| |||| |||
Sbjct 39219 TGGTGATAGGCGGTGTGTTCTGCAATGCTGCCCGCCAGCTGAGCCACTTTCACCTC 39274
>seq3070
Length=111036
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||| | || ||| ||||| |||| ||| || || ||||||
Sbjct 50561 TAGATGTTGCTGGTGTAGGCCTCGATGCTCTCGTTGTTGCCCAGGATCTGTGCGGTGGAG 50502
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003
|| || |||||||| |||| || ||||||||||| | |||
Sbjct 50501 GCGGTAGGCATGGGCGCCAGCAGCAGGCTGTTGCGCACACC 50461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 606017082316200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |