Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq6977 86.0 4e-12 >seq6977 Length=186913 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||||| |||||| ||||| |||| ||| || ||||| ||||| || || | | Sbjct 62766 CCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGAC 62707 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| || |||| || | || || ||| | || || | |||||||||||| | ||| Sbjct 62706 AAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGA 62647 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||| || || || ||| || | | ||| ||||||| ||| || Sbjct 62646 ATACCTTCCTTATCCTGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACT 62587 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | || || || || || || | |||||||||||||| ||||| Sbjct 62586 TCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| |||||| || ||||| || | || ||||||||| || || || || | | Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| | || || | || || ||| | || || | |||||| || || | ||| Sbjct 62250 AAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 62191 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||||||| ||||| || | || | | || || | | |||||| Sbjct 62190 ATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACT 62131 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || | |||||| || || || || | ||||| ||||| ||||||||| Sbjct 62130 TCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343234696278935