Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq7011 111 2e-19
seq64647 107 2e-18
seq32741 98.7 1e-15
seq941051 84.2 3e-11
seq3070 84.2 3e-11
>seq7011
Length=120798
Score = 111 bits (122), Expect = 2e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232
|| ||| ||||| || |||| ||||| |||||||| ||||| ||||| || |||||
Sbjct 26891 CTATGCGGAGCGGATCATCGCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTT 26950
Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292
| | | || | ||||| |||||||| || || ||||| || || |||| ||||||
Sbjct 26951 CGCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGA 27010
Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||||| || |||||||| |||||| || |||||
Sbjct 27011 GCTTATCTCCCGGGACGAGGGGCTCCACACCGACTTTGC 27049
>seq64647
Length=8232
Score = 107 bits (118), Expect = 2e-18
Identities = 132/180 (73%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080
|| || || ||||||||||||||||| ||||||||| |||| |||| ||||| |||
Sbjct 8004 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 7945
Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140
|| || || | | ||| | |||| |||||||| ||| | ||| || |||||||||
Sbjct 7944 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATGAGGGACACTTCACCG 7885
Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATG----CCGCCAACTGCGCCACTTTCATCTC 176196
||||| || || | | ||||| |||| |||||| ||| |||||||||| |||
Sbjct 7884 TGGTGATAGGCGGTGTGTTCTGC----AATGCTGCCCGCCAGCTGAGCCACTTTCACCTC 7829
>seq32741
Length=53758
Score = 98.7 bits (108), Expect = 1e-15
Identities = 130/180 (72%), Gaps = 8/180 (4%)
Strand=Plus/Plus
Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080
|| || || ||||||||||||||||| ||||||||| |||| |||| ||||| |||
Sbjct 39099 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 39158
Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140
|| || || | | ||| | |||| |||||||| || | || || |||||||||
Sbjct 39159 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTAGACATAAGGGACACTTCACCG 39218
Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATG----CCGCCAACTGCGCCACTTTCATCTC 176196
||||| || || | | ||||| |||| |||||| ||| |||||||||| |||
Sbjct 39219 TGGTGATAGGCGGTGTGTTCTGC----AATGCTGCCCGCCAGCTGAGCCACTTTCACCTC 39274
>seq941051
Length=452
Score = 84.2 bits (92), Expect = 3e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971
|| || | |||||||||||| ||||| | || |||||||| ||| ||||| || ||
Sbjct 22 TTACCTCTAAGAGGGAAGACTCCGTATTTGTCACGACCAACAACACCAAGACCTGCTACT 81
Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT 177017
|| || || || || || || |||||||||| |||||| |||||||
Sbjct 82 GCCAGGGTCTTGGCTGAGTCTCCCTCTGTCAAGATGAGCGTACACT 127
>seq3070
Length=111036
Score = 84.2 bits (92), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364
||||| || || || || ||||| ||||| ||||| ||||||| ||||| |||||| ||
Sbjct 47537 GAGACAGGAACCCCCTACATGCTGTACAAGGACGCGTGTAACCGCAAGAGCAATCAACAG 47596
Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405
||| | || ||||| | ||||||||||| ||||||||
Sbjct 47597 AATCTAGGCACTATCAAATGCTCCAACCTCTGCACAGAAAT 47637
Score = 84.2 bits (92), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364
||||| || || || || ||||| ||||| ||||| ||||||| ||||| |||||| ||
Sbjct 89459 GAGACAGGAACCCCCTACATGCTGTACAAGGACGCGTGTAACCGCAAGAGCAATCAACAG 89518
Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405
||| | || ||||| | ||||||||||| ||||||||
Sbjct 89519 AATCTAGGCACTATCAAATGCTCCAACCTCTGCACAGAAAT 89559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613163950020400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |