Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7011 111 2e-19 seq64647 107 2e-18 seq32741 98.7 1e-15 seq941051 84.2 3e-11 seq3070 84.2 3e-11 >seq7011 Length=120798 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 || ||| ||||| || |||| ||||| |||||||| ||||| ||||| || ||||| Sbjct 26891 CTATGCGGAGCGGATCATCGCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTT 26950 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | | | || | ||||| |||||||| || || ||||| || || |||| |||||| Sbjct 26951 CGCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGA 27010 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||| || |||||||| |||||| || ||||| Sbjct 27011 GCTTATCTCCCGGGACGAGGGGCTCCACACCGACTTTGC 27049 >seq64647 Length=8232 Score = 107 bits (118), Expect = 2e-18 Identities = 132/180 (73%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080 || || || ||||||||||||||||| ||||||||| |||| |||| ||||| ||| Sbjct 8004 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 7945 Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140 || || || | | ||| | |||| |||||||| ||| | ||| || ||||||||| Sbjct 7944 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATGAGGGACACTTCACCG 7885 Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATG----CCGCCAACTGCGCCACTTTCATCTC 176196 ||||| || || | | ||||| |||| |||||| ||| |||||||||| ||| Sbjct 7884 TGGTGATAGGCGGTGTGTTCTGC----AATGCTGCCCGCCAGCTGAGCCACTTTCACCTC 7829 >seq32741 Length=53758 Score = 98.7 bits (108), Expect = 1e-15 Identities = 130/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Plus Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080 || || || ||||||||||||||||| ||||||||| |||| |||| ||||| ||| Sbjct 39099 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 39158 Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140 || || || | | ||| | |||| |||||||| || | || || ||||||||| Sbjct 39159 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTAGACATAAGGGACACTTCACCG 39218 Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATG----CCGCCAACTGCGCCACTTTCATCTC 176196 ||||| || || | | ||||| |||| |||||| ||| |||||||||| ||| Sbjct 39219 TGGTGATAGGCGGTGTGTTCTGC----AATGCTGCCCGCCAGCTGAGCCACTTTCACCTC 39274 >seq941051 Length=452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971 || || | |||||||||||| ||||| | || |||||||| ||| ||||| || || Sbjct 22 TTACCTCTAAGAGGGAAGACTCCGTATTTGTCACGACCAACAACACCAAGACCTGCTACT 81 Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT 177017 || || || || || || || |||||||||| |||||| ||||||| Sbjct 82 GCCAGGGTCTTGGCTGAGTCTCCCTCTGTCAAGATGAGCGTACACT 127 >seq3070 Length=111036 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||| || || || || ||||| ||||| ||||| ||||||| ||||| |||||| || Sbjct 47537 GAGACAGGAACCCCCTACATGCTGTACAAGGACGCGTGTAACCGCAAGAGCAATCAACAG 47596 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405 ||| | || ||||| | ||||||||||| |||||||| Sbjct 47597 AATCTAGGCACTATCAAATGCTCCAACCTCTGCACAGAAAT 47637 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||| || || || || ||||| ||||| ||||| ||||||| ||||| |||||| || Sbjct 89459 GAGACAGGAACCCCCTACATGCTGTACAAGGACGCGTGTAACCGCAAGAGCAATCAACAG 89518 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405 ||| | || ||||| | ||||||||||| |||||||| Sbjct 89519 AATCTAGGCACTATCAAATGCTCCAACCTCTGCACAGAAAT 89559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613163950020400