Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq64647 104 3e-17
seq7011 89.7 6e-13
seq3070 89.7 6e-13
>seq64647
Length=8232
Score = 104 bits (114), Expect = 3e-17
Identities = 234/352 (66%), Gaps = 0/352 (0%)
Strand=Plus/Minus
Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350
|| || || || || |||| ||||| || ||||||||||| ||| |||| |||| |
Sbjct 8184 CCAGTGCCAATGCCCTCGGCGCCATTGACAAGAACCATTGGGATGACAGGCACGTAATAC 8125
Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410
|| || || ||| | || || | ||| |||||||| | |||| ||| |||||
Sbjct 8124 TCGGGCTCGATTTTTTGATTGTCTTCGTTCAAATAGTTGAGAAGAGGGTTATCTTGAGGA 8065
Query 168411 TCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCA 168470
| || || | | |||| | || || ||||||||||| | | | ||
Sbjct 8064 TGGAAAATGTGGTGAGCGAGAGGAGACAGCTTGGTGAAAATGTAACGAGAACTCGCAGAG 8005
Query 168471 TCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTG 168530
|| || || ||||||||||||||||| || |||||| || | |||| ||| ||||||
Sbjct 8004 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 7945
Query 168531 TTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCACCA 168590
|| || || | ||| | |||| || ||||| ||| | | ||| ||||||||
Sbjct 7944 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATGAGGGACACTTCACCG 7885
Query 168591 TGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCA 168642
||||| || || | | || || | ||||||| || ||||| ||||
Sbjct 7884 TGGTGATAGGCGGTGTGTTCTGCAATGCTGCCCGCCAGCTGAGCCACTTTCA 7833
>seq7011
Length=120798
Score = 89.7 bits (98), Expect = 6e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || |||||| ||||| || ||||| ||||| || || |||| |||||
Sbjct 27050 GGCAAAGTCGGTGTGGAGCCCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTCAGGCC 26991
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||| || || |||||||||| ||| | || | | ||| ||||||||||| |||||
Sbjct 26990 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAAAAGAT 26931
Query 117393 ACCCTCCAC 117401
||||| ||
Sbjct 26930 TCCCTCAAC 26922
>seq3070
Length=111036
Score = 89.7 bits (98), Expect = 6e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | ||||||||| || | |||||| | || || || || | ||||| ||| ||
Sbjct 47647 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 47588
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618
||||| ||| ||||| |||||||| ||||||||||| || || ||||||
Sbjct 47587 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCC 47536
Score = 89.7 bits (98), Expect = 6e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | ||||||||| || | |||||| | || || || || | ||||| ||| ||
Sbjct 89569 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 89510
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618
||||| ||| ||||| |||||||| ||||||||||| || || ||||||
Sbjct 89509 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCC 89458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582777908781800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |