Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq64647 104 3e-17 seq7011 89.7 6e-13 seq3070 89.7 6e-13 >seq64647 Length=8232 Score = 104 bits (114), Expect = 3e-17 Identities = 234/352 (66%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 || || || || || |||| ||||| || ||||||||||| ||| |||| |||| | Sbjct 8184 CCAGTGCCAATGCCCTCGGCGCCATTGACAAGAACCATTGGGATGACAGGCACGTAATAC 8125 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410 || || || ||| | || || | ||| |||||||| | |||| ||| ||||| Sbjct 8124 TCGGGCTCGATTTTTTGATTGTCTTCGTTCAAATAGTTGAGAAGAGGGTTATCTTGAGGA 8065 Query 168411 TCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCA 168470 | || || | | |||| | || || ||||||||||| | | | || Sbjct 8064 TGGAAAATGTGGTGAGCGAGAGGAGACAGCTTGGTGAAAATGTAACGAGAACTCGCAGAG 8005 Query 168471 TCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTG 168530 || || || ||||||||||||||||| || |||||| || | |||| ||| |||||| Sbjct 8004 TCTTTTCCGCCCATGAGACGCGTACCGAACTGACCAATGGGCTGCAGAACGTTGATGTTG 7945 Query 168531 TTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCACCA 168590 || || || | ||| | |||| || ||||| ||| | | ||| |||||||| Sbjct 7944 TTGGAGCCAACGAAGTTCTGGGCCAGGTTGACAATAGTGGACATGAGGGACACTTCACCG 7885 Query 168591 TGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCA 168642 ||||| || || | | || || | ||||||| || ||||| |||| Sbjct 7884 TGGTGATAGGCGGTGTGTTCTGCAATGCTGCCCGCCAGCTGAGCCACTTTCA 7833 >seq7011 Length=120798 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||| ||||| || ||||| ||||| || || |||| ||||| Sbjct 27050 GGCAAAGTCGGTGTGGAGCCCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTCAGGCC 26991 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || |||||||||| ||| | || | | ||| ||||||||||| ||||| Sbjct 26990 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAAAAGAT 26931 Query 117393 ACCCTCCAC 117401 ||||| || Sbjct 26930 TCCCTCAAC 26922 >seq3070 Length=111036 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||||||||| || | |||||| | || || || || | ||||| ||| || Sbjct 47647 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 47588 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618 ||||| ||| ||||| |||||||| ||||||||||| || || |||||| Sbjct 47587 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCC 47536 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||||||||| || | |||||| | || || || || | ||||| ||| || Sbjct 89569 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 89510 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618 ||||| ||| ||||| |||||||| ||||||||||| || || |||||| Sbjct 89509 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCC 89458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582777908781800