Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6977 183 7e-41 seq23011 129 1e-24 seq4196 105 1e-17 seq79008 100 6e-16 >seq6977 Length=186913 Score = 183 bits (202), Expect = 7e-41 Identities = 165/205 (80%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 |||||| || || ||||||||||| ||||| || | |||| || | || ||||| |||| Sbjct 62287 GTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGACAAG-GTGCGGCCGTCTTCAAGCT 62229 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 ||||||| |||||||| || || |||||||| || ||||||||||||||||| ||||||| Sbjct 62228 GCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTGAATTT 62169 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | ||| || |||||||| || ||||| |||||||||||| |||| |||||| || | Sbjct 62168 TAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGCCGG 62109 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| ||||| | ||||| Sbjct 62108 TCAGGGTTTTCACGAAAATCTGCAT 62084 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| |||||||| || | | ||| | |||||||| ||||| Sbjct 61858 GTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCAAGCTG 61799 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| || |||||||| || ||||| ||||| || || || || || Sbjct 61798 CTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGGATCTT 61739 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| ||||| ||||||||||||||| || ||||| ||||| | |||||||| || Sbjct 61738 TGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGACTTCCAGGGTGATTGTCTTTCCGGT 61679 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 61678 GAGGGTCTTCACGAAAATTTGCAT 61655 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || |||||||||||||| || || | ||||| | || ||||| Sbjct 62520 ACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCC 62461 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||||||| ||||| ||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct 62460 AACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGA 62401 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| |||||||| || ||||| ||||| ||| ||||| ||||| | ||||| Sbjct 62400 ATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTG 62341 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 62340 CCAGTGAGGGTCTTGACGAAAATTTGCAT 62312 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||||| || |||||||||||||| || | || || | || ||||| | ||| Sbjct 61402 GTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTCCAACTG 61343 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || |||||||| || || ||||| |||||||||||||| || ||||||||||| Sbjct 61342 TTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGAATTTT 61283 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || |||||||||||||| ||| ||| ||||| | ||| | ||||| || || Sbjct 61282 AGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTCTTACCGGT 61223 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | ||||| Sbjct 61222 TAGAGTTTTAACAAAAATCTGCAT 61199 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || ||||||||||| | || || | |||||||| Sbjct 62976 ACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCTTCC 62917 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || ||||| || || || ||||| || ||||||||||| ||||| || Sbjct 62916 AGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 62857 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||||||||||||||| ||| ||||| ||||| | ||||| Sbjct 62856 ATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTG 62797 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||||| ||||| | ||||| Sbjct 62796 CCAGTCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| |||||||| || | | ||| | |||||||| ||||| Sbjct 62743 GTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCAAGCTG 62684 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| || || || || || ||||| ||||| || || || || || Sbjct 62683 CTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCTTCCTTATCCTGGATCTT 62624 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || || || |||||||| ||| ||| ||||| ||||| | ||||| || || Sbjct 62623 TGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTCTTGCCAGT 62564 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| | |||||| Sbjct 62563 GAGTGTTTTTACGAAGATTTGCAT 62540 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || |||||||||||||| | ||||| | || ||||| Sbjct 61635 ACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCC 61576 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || || || ||||| || || ||||| ||||| || ||||| ||||| || Sbjct 61575 AATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 61516 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || || ||||||||||||||| || ||||| ||||||| ||||| Sbjct 61515 ATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTG 61456 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 61455 CCGGTGAGGGTCTTAACGAAAATTTGCAT 61427 Score = 141 bits (156), Expect = 2e-28 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | |||||||| ||||| ||||| ||||| ||||||||||| | || || | Sbjct 62073 AGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAGAGGGTACGA 62014 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| ||||| || || || ||||| || || || ||||| || ||||||||||| Sbjct 62013 CCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCC 61954 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 ||||| || || || ||| |||||||||||||||||||| Sbjct 61953 TTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGA 61913 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || || ||||| ||||| ||||| || |||||||| || | ||| || | Sbjct 61188 AGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGTGCGG 61129 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || ||||| ||||| || |||||||| || ||||| ||||| Sbjct 61128 CCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGGAATACCTTCC 61069 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || ||||| || || || || ||||||||||| Sbjct 61068 TTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCGACTTCAAGGGTG 61009 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | || || ||||| | ||||| Sbjct 61008 ATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || ||||||||||| | || || | || || || Sbjct 60951 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCC 60892 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || ||||| || ||||||||||| ||||| || Sbjct 60891 AGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 60832 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||||||||||||||| || ||| ||||| || || | ||||| Sbjct 60831 ATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTG 60772 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 60771 CCAGTTAGGGTTTTCACGAAGATCTGCAT 60743 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||| || ||| | || ||||||||||| || || |||||||| || | ||| || | Sbjct 63214 GAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCG 63155 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| ||||| || || || ||||| || || || ||||| || ||||| ||||| Sbjct 63154 GCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTC 63095 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || ||| ||| || || ||||| || ||||| || || |||||||| Sbjct 63094 CTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGT 63035 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | || || ||||| | ||||| Sbjct 63034 GATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 >seq23011 Length=82770 Score = 129 bits (142), Expect = 1e-24 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 || ||||||||||||||||| ||||| ||||||||||| ||||| || || ||||| ||| Sbjct 77562 CTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCT 77621 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || |||||||| || || || || || |||||||| || ||| ||||| |||||| Sbjct 77622 TCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAGG 77681 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||||| ||||| | ||||| Sbjct 77682 GTGATGGTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 77722 >seq4196 Length=56364 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || || || ||||| | |||||||| || ||||| || ||| Sbjct 9850 CCATCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCT 9791 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||||||||| ||||| || || || || || ||| || ||||| |||||| Sbjct 9790 TTATCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTA 9731 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| || || | ||||| Sbjct 9730 ATGGTCTTACCCGTGAGGGTTTTCACAAATATCTGCAT 9693 >seq79008 Length=3354 Score = 100 bits (110), Expect = 6e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 || ||||||||||||||||| ||||| ||||||||||| ||||| || || ||||| ||| Sbjct 3245 CTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCT 3304 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAA 195084 || |||||||| || || || || || |||||||| || ||| Sbjct 3305 TCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAA 3349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1095597653005065