Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6977 111 1e-19 >seq6977 Length=186913 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || |||||| || | ||| || ||||| || || ||||| |||||| | || |||| Sbjct 63208 CAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGGCCATC 63149 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||||||||| |||||||| || || || |||||||| | || | || ||||| || Sbjct 63148 TTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTCCTTATC 63089 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | | || | || |||||| || || | ||| || || Sbjct 63088 CTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGTGATTGT 63029 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| || ||||| |||||||| |||||||||||| Sbjct 63028 TTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 62995 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34779 TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGT 34838 |||| ||| ||||||||| || || ||||||||||| | || |||| |||||||| Sbjct 61173 TGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGTGCGGCCATCTTCCAGCTGC 61114 Query 34839 TTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTC 34898 || ||||| || || || || || ||||| | || | || ||||| || ||||| Sbjct 61113 TTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGGATCTTA 61054 Query 34899 TGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTG 34958 || || | | || | ||| |||||| || || | ||| ||||| || || ||| Sbjct 61053 GCCTTCACATTTTCAATAGTATCAGAGGCCTCGACTTCAAGGGTGATGGTCTTGCCGGTG 60994 Query 34959 AGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| |||||||||||| Sbjct 60993 AGGGTCTTCACGAAGATCTGCATA 60970 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| ||||| ||||||||||| || | || | || |||| ||| || ||||| || Sbjct 62503 TTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAA 62444 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| ||||| | || | || |||||||| |||||| ||||||| Sbjct 62443 AATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGACGTT 62384 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || ||| || || |||| ||| ||||| || || ||||| ||||| || Sbjct 62383 TTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 62324 Query 34970 AAAGATCTGCATA 34982 || || |||||| Sbjct 62323 GAAAATTTGCATA 62311 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| || || || || || ||| | ||| | || ||||| || || || ||||| Sbjct 60934 TTCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAA 60875 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || ||| Sbjct 60874 GATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTT 60815 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| ||| ||||| |||| || ||||| || || || || || ||||| Sbjct 60814 CTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCAC 60755 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 60754 GAAGATCTGCAT 60743 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| || || || || || ||| | || |||| ||||||||||| || ||||| Sbjct 62959 TTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAA 62900 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || ||| Sbjct 62899 GATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTT 62840 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || ||| || || |||| ||| ||||| || || || || || || || Sbjct 62839 CTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAAC 62780 Query 34970 AAAGATCTGCATA 34982 || ||||||||| Sbjct 62779 GAAAATCTGCATA 62767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320769333579960