Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq605 149 5e-31 >seq605 Length=553772 Score = 149 bits (164), Expect = 5e-31 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || ||||| ||||| |||||| | |||||||||| |||||||| ||||| ||||| Sbjct 75991 AGGCCAGTGACTTGAGCGATCATGCAGGTGAGGAGAGCATAGCTGGCAATGTTGAAGGGA 75932 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || | |||||||| | |||| |||||||||||||||||| ||||| ||||| Sbjct 75931 ACACCCAAGCCCATGTCTGCAGACCGCTGGTAGAGCTGACACGACAGCTCCCCGTCAGCA 75872 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 || || ||||| |||| | ||| |||||||| || ||||||| | || ||| ||| Sbjct 75871 ACATAGAACTGGCACAGGACGTGACACGGAGGCAGCGCCATGATCCGCATGTCAGCAGGG 75812 Query 30049 TTCCAGGCGCACACGAT 30065 ||||| || ||| ||| Sbjct 75811 TTCCACGCAGACAGGAT 75795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403753632529235