Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq6977 168 5e-37 seq23011 102 6e-17 seq4196 100 2e-16 >seq6977 Length=186913 Score = 168 bits (186), Expect = 5e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| ||||||| || || |||||||| ||||||||||| || ||||| || | Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | |||||||| || || |||| ||||||||| ||||| ||| Sbjct 62250 AAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 62191 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| || |||||||| || ||| | || | || || || | ||||||| Sbjct 62190 ATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACT 62131 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| | ||| |||||||| | ||||| || || ||||||||| Sbjct 62130 TCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| | ||| | || || ||||| || ||||| ||||| |||||||| || | Sbjct 61425 CCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGAC 61366 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || ||||| || || || ||||| || | |||||| || || || ||| Sbjct 61365 AGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGA 61306 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| |||||||||||||| |||||| | || | ||||| || | ||| ||| Sbjct 61305 ATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACT 61246 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || ||||||| |||||| ||||| |||||||| Sbjct 61245 TCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| |||||||||||||| || ||||||||||| | || || | | || |||| ||| Sbjct 60946 ATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTG 60887 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| || | |||||| || ||||| ||||||||||| || || || || || Sbjct 60886 CTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 60827 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | |||||||| | ||| ||||| || |||| || ||||| || Sbjct 60826 AGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGT 60767 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || || ||||||||| Sbjct 60766 TAGGGTTTTCACGAAGATCTGCATG 60742 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||||||||||||||| ||||| || || | | ||| | | | || ||||| || Sbjct 62515 ATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTG 62456 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| || || || | ||| ||||| ||||| ||||||||||| || || ||||| || Sbjct 62455 CTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTT 62396 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||| || |||| | || || || | ||| ||||| || |||| || ||||| || Sbjct 62395 TGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGT 62336 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 62335 GAGGGTCTTGACGAAAATTTGCAT 62312 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| |||||||| || ||||||||||| | || || | | |||| |||| || Sbjct 62971 ATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTG 62912 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | |||||| || ||||| ||||||||||| || || || || || Sbjct 62911 TTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 62852 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| || | ||| ||||| || |||| || ||||| || Sbjct 62851 AGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGT 62792 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 62791 CAGGGTTTTAACGAAAATCTGCAT 62768 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| ||||| || || || || || || |||||||| || | | || | | |||| || Sbjct 63205 AACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTC 63146 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || || || || ||||| || | |||||| || ||||| ||||| ||||| ||||| || Sbjct 63145 CAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTCCTTATCCTG 63086 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || ||| || ||| |||| | ||| || || | || || ||||| |||| ||||| Sbjct 63085 GATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGTGATTGTTTT 63026 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | || || || || |||||||| Sbjct 63025 GCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || ||||||||||| | | ||| | | || |||||||| Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTG 61571 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| || | |||||| || ||||| || || ||||| || || || || || Sbjct 61570 CTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 61511 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| |||| | ||||| || | || ||||| || || | || |||||||| Sbjct 61510 TGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGT 61451 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || || || || |||||| Sbjct 61450 GAGGGTCTTAACGAAAATTTGCATG 61426 >seq23011 Length=82770 Score = 102 bits (112), Expect = 6e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 101309 CTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCT 101368 ||| |||| || | ||||| |||||||| || | ||||||||||| || ||||| ||| Sbjct 77562 CTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCT 77621 Query 101369 TCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGA 101428 || || ||||| || || ||| ||| |||| | || ||||| | ||||| ||||| Sbjct 77622 TCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAGG 77681 Query 101429 GTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| || || || || | ||||| || || |||||||| Sbjct 77682 GTGATGGTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 77722 >seq4196 Length=56364 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| || | ||||| || ||||| || | | |||||| || || ||||| || |||| Sbjct 9849 CATCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTT 9790 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 ||||||||||||| ||| ||| |||| | ||| || || | || ||||| || || | Sbjct 9789 TATCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAA 9730 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || | ||||| ||||||||||||||| Sbjct 9729 TGGTCTTACCCGTGAGGGTTTTCACAAATATCTGCATG 9692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391561311830115