Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 168 5e-37
seq23011 102 6e-17
seq4196 100 2e-16
>seq6977
Length=186913
Score = 168 bits (186), Expect = 5e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||||| || || |||||||| ||||||||||| || ||||| || |
Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | | || || | |||||||| || || |||| ||||||||| ||||| |||
Sbjct 62250 AAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 62191
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || |||||||| || ||| | || | || || || | |||||||
Sbjct 62190 ATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACT 62131
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|||||||| | ||| |||||||| | ||||| || || |||||||||
Sbjct 62130 TCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || || ||||| || ||||| ||||| |||||||| || |
Sbjct 61425 CCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGAC 61366
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | || ||||| || || || ||||| || | |||||| || || || |||
Sbjct 61365 AGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGA 61306
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| |||||||||||||| |||||| | || | ||||| || | ||| |||
Sbjct 61305 ATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACT 61246
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||| || || ||||||| |||||| ||||| ||||||||
Sbjct 61245 TCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 136 bits (150), Expect = 3e-27
Identities = 153/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| |||||||||||||| || ||||||||||| | || || | | || |||| |||
Sbjct 60946 ATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTG 60887
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | |||||| || ||||| ||||||||||| || || || || ||
Sbjct 60886 CTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 60827
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | |||||||| | ||| ||||| || |||| || ||||| ||
Sbjct 60826 AGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGT 60767
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
|| ||||| || || |||||||||
Sbjct 60766 TAGGGTTTTCACGAAGATCTGCATG 60742
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||||||||||||||| ||||| || || | | ||| | | | || ||||| ||
Sbjct 62515 ATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTG 62456
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|||||| || || || | ||| ||||| ||||| ||||||||||| || || ||||| ||
Sbjct 62455 CTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTT 62396
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||| || |||| | || || || | ||| ||||| || |||| || ||||| ||
Sbjct 62395 TGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGT 62336
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| || || || || || |||||
Sbjct 62335 GAGGGTCTTGACGAAAATTTGCAT 62312
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| |||||||| || ||||||||||| | || || | | |||| |||| ||
Sbjct 62971 ATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTG 62912
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || ||||| || | |||||| || ||||| ||||||||||| || || || || ||
Sbjct 62911 TTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 62852
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | ||||| || | ||| ||||| || |||| || ||||| ||
Sbjct 62851 AGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAGT 62792
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 62791 CAGGGTTTTAACGAAAATCTGCAT 62768
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| ||||| || || || || || || |||||||| || | | || | | |||| ||
Sbjct 63205 AACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTC 63146
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
|| || || || ||||| || | |||||| || ||||| ||||| ||||| ||||| ||
Sbjct 63145 CAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTCCTTATCCTG 63086
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|| ||| || ||| |||| | ||| || || | || || ||||| |||| |||||
Sbjct 63085 GATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGTGATTGTTTT 63026
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||| | || || || || ||||||||
Sbjct 63025 GCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| ||||| || || ||||||||||| | | ||| | | || ||||||||
Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTG 61571
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | |||||| || ||||| || || ||||| || || || || ||
Sbjct 61570 CTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 61511
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| || ||| |||| | ||||| || | || ||||| || || | || ||||||||
Sbjct 61510 TGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGT 61451
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || || || || ||||||
Sbjct 61450 GAGGGTCTTAACGAAAATTTGCATG 61426
>seq23011
Length=82770
Score = 102 bits (112), Expect = 6e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 101309 CTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCT 101368
||| |||| || | ||||| |||||||| || | ||||||||||| || ||||| |||
Sbjct 77562 CTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCT 77621
Query 101369 TCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGA 101428
|| || ||||| || || ||| ||| |||| | || ||||| | ||||| |||||
Sbjct 77622 TCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAGG 77681
Query 101429 GTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| || || || || | ||||| || || ||||||||
Sbjct 77682 GTGATGGTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 77722
>seq4196
Length=56364
Score = 100 bits (110), Expect = 2e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372
|||| || | ||||| || ||||| || | | |||||| || || ||||| || ||||
Sbjct 9849 CATCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTT 9790
Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432
||||||||||||| ||| ||| |||| | ||| || || | || ||||| || || |
Sbjct 9789 TATCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAA 9730
Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || || || | ||||| |||||||||||||||
Sbjct 9729 TGGTCTTACCCGTGAGGGTTTTCACAAATATCTGCATG 9692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391561311830115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |