Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 123 2e-23
seq23011 84.2 2e-11
>seq6977
Length=186913
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||| | || |||| |||||| || || ||| || |||||||||||||| |||||
Sbjct 61426 GCCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGA 61367
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | ||| |||| |||||||| || || ||||| || || ||||| || || | ||
Sbjct 61366 CAGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGG 61307
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| ||| ||||| || ||| || |||||| | | | ||||| || || ||
Sbjct 61306 AATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGAC 61247
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || || || || || | |||||| ||||||||||||||
Sbjct 61246 TTCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || || || ||||||||||| ||||| || || | | || |||| ||
Sbjct 62293 CACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTC 62234
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
| |||||||||||| || ||||| |||||||| || | ||||| ||| || |||||
Sbjct 62233 AAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTG 62174
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
||| || || ||| | | | || || || ||||| || | |||||||| ||
Sbjct 62173 AATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTT 62114
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| ||||| || |||||||||||
Sbjct 62113 GCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084
Score = 102 bits (112), Expect = 6e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| || || |||||| | || |||| ||||||||||||||||| ||
Sbjct 62502 TCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAA 62443
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTAC 48691
|| || || ||||| || | ||||| ||| |||||||| ||||||| ||| ||
Sbjct 62442 ATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTGAC 62387
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| || || ||||||||||||||||| ||| | ||| |||| ||||| ||
Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTG 61571
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| |||||||| || || ||||| || || | || | || |||||||| |||||
Sbjct 61570 CTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 61511
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
| || ||| | | | || || ||||| || |||| ||||| || || || ||
Sbjct 61510 TGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGT 61451
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
| || || || ||||| |||||
Sbjct 61450 GAGGGTCTTAACGAAAATTTGCAT 61427
>seq23011
Length=82770
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/161 (72%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671
|| || | |||||| || ||||| || |||||||||||||| | ||||| || ||||||
Sbjct 77568 TCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCTTCCTTG 77627
Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731
|| ||||| ||| ||| | | | || || ||||||||||| | || ||
Sbjct 77628 TCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAGGGTGATG 77687
Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTG 48772
|| || ||||| | ||||| || || ||||||||| ||||
Sbjct 77688 GTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCATC-TGTG 77727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 376403120587485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |