Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7011 109 1e-18 seq3070 95.1 2e-14 >seq7011 Length=120798 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 48320 AGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTC 48379 || |||||||||||||||||||| || || ||||| ||||| ||||| |||||| || Sbjct 25784 AGGGCCCAGTCTGCCTTCTTCTTAATACAGGGCATGGTCTCGATGGCGTTGAAGAGTCTC 25725 Query 48380 TTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGC 48439 | ||| | | ||| | || ||||| ||| |||| ||||||||| ||||| Sbjct 25724 GTCTGCTCGGCGGTGTCGGAGACGTAGGTGTTGATCAGCAGACTGTACATCTCGGAGTGA 25665 Query 48440 ACATTCTCTATAGCGATCTGGAACCCGTAGAAG 48472 | ||||| || ||||||||||||||||||||| Sbjct 25664 ATGTTCTCCATGGCGATCTGGAACCCGTAGAAG 25632 Score = 102 bits (112), Expect = 1e-16 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 ||| || || |||||| ||| ||||| || | | |||||||||||| |||| | Sbjct 27089 CTCAGAAGGCTTGTTGACCAGCAGCTTG---TACATAAGGCAGGCAAAGTCGGTGTGGAG 27033 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||||||| ||| ||| ||||| |||| || || ||||| | || | || Sbjct 27032 CCCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCGCGCTT 26973 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 || |||||||| || | ||||| || || ||||| ||||| ||||| ||||| || || Sbjct 26972 CTTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAAAAGATTCCCTCAACTGCGGCAAA 26913 Query 48271 CGCGGTGAGCCTCTC 48285 ||| ||| || ||| Sbjct 26912 GGCGATGATCCGCTC 26898 >seq3070 Length=111036 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||| |||||||||||||||||| ||||| |||||||| ||| ||| || |||||| Sbjct 50549 GTGTAGGCCTCGATGCTCTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTAGGCATG 50490 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 || |||| ||| || ||||| | ||| || || Sbjct 50489 GGCGCCAGCAGCAGGCTGTTGCGCACACCATG 50458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920160007148800