Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7011 118 2e-21 seq3070 102 1e-16 >seq7011 Length=120798 Score = 118 bits (130), Expect = 2e-21 Identities = 146/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 |||||| | | |||||||| || || ||||| ||||||||| ||| || || || || Sbjct 26898 GAGCGGATCATCGCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCC 26957 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATC 25995 ||||||||||| ||| || || |||||||| ||| ||| ||||||||| ||| Sbjct 26958 ATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATC 27017 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | |||||||||| ||||||| || ||||||||||| | |||| | | || || Sbjct 27018 TCCCGGGACGAGGGGCTCCACACCGACTTTGCCTGCCTTATGTACAAG---CTGCTGGTC 27074 Query 26056 CACAAACCTTCTCAAGAGA 26074 |||| |||||| | |||| Sbjct 27075 AACAAGCCTTCTGAGGAGA 27093 >seq3070 Length=111036 Score = 102 bits (112), Expect = 1e-16 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 221177 TCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACC 221236 ||||||||||||||||||||||||||||| || ||| |||||| |||||||| |||| | Sbjct 50540 TCGATGCTCTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTAGGCATGGGCGCCAGC 50481 Query 221237 AGCAGACTGTTGCGCA 221252 ||||| |||||||||| Sbjct 50480 AGCAGGCTGTTGCGCA 50465 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 ||||||||||||||||||||||||| || ||| |||||| |||||||| |||| ||||| Sbjct 92741 TGCTCTCGTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTAGGCATGGGCGCCAGCAGCA 92682 Query 221241 GACTGTTGCGCA 221252 | |||||||||| Sbjct 92681 GGCTGTTGCGCA 92670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917504824100800