Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq64647 98.7 1e-15 seq7011 89.7 6e-13 seq941051 84.2 3e-11 >seq64647 Length=8232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 233/352 (66%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 14430 TGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGTGAAG 14489 |||| ||||| || ||||||| | || || | | || || ||||| ||||||| Sbjct 7833 TGAAAGTGGCTCAGCTGGCGGGCAGCATTGCAGAACACACCGCCTATCACCACGGTGAAG 7892 Query 14490 TATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATTA 14549 | ||| | | ||| ||||| || |||| | ||| | || || |||||||| | Sbjct 7893 TGTCCCTCATGTCCACTATTGTCAACCTGGCCCAGAACTTCGTTGGCTCCAACAACATCA 7952 Query 14550 ACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTAAGGATGCTTCTC 14609 || |||| | || |||||| || ||||||||||||||||| || || || || | Sbjct 7953 ACGTTCTGCAGCCCATTGGTCAGTTCGGTACGCGTCTCATGGGCGGAAAAGACTCTGCGA 8012 Query 14610 AGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGATCTTTGATCCTCGGG 14669 | | ||||||||||| || || | |||| | | || || |||||| | Sbjct 8013 GTTCTCGTTACATTTTCACCAAGCTGTCTCCTCTCGCTCACCACATTTTCCATCCTCAAG 8072 Query 14670 ATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTCCATTGAACCAGACTTTTACA 14729 || |||| | |||||||| ||| |||| || | || || || || | |||| Sbjct 8073 ATAACCCTCTTCTCAACTATTTGAACGAAGACAATCAAAAAATCGAGCCCGAGTATTACG 8132 Query 14730 TGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTATCGGTACGGG 14781 |||| | ||||||||||| || ||||| ||||||| || || || || Sbjct 8133 TGCCTGTCATCCCAATGGTTCTTGTCAATGGCGCCGAGGGCATTGGCACTGG 8184 >seq7011 Length=120798 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || ||||| ||||| ||||||||||| ||| | | || | ||| |||||||||| || Sbjct 26922 GTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGC 26981 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || ||||| ||||| |||| || || ||||| ||||| || ||||| |||||| Sbjct 26982 CTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATCTCCCGGGACGAGGGGCTCCACACC 27041 Query 65221 GAGTTTGCC 65229 || |||||| Sbjct 27042 GACTTTGCC 27050 >seq941051 Length=452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 13541 TCCAAAATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCT 13600 |||||| | | || ||||| ||| | || ||||| ||| | || || || ||| Sbjct 191 TCCAAACTGAAGGGCATTCCAAAGCTCGAGGACGCCAACGATGCTGGCACACGCTTCTCT 132 Query 13601 GGAAAGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGT 13660 ||||||| ||||| | |||||||| || || || || ||||| || || || ||| Sbjct 131 TCTGAGTGTACGCTCATCTTGACAGAGGGAGACTCAGCCAAGACCCTGGCAGTAGCAGGT 72 Query 13661 CTCTCTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA 13711 || ||| ||||||||||| | ||||| || ||||| ||| | |||||| Sbjct 71 CTTGGTGTTGTTGGTCGTGACAAATACGGAGTCTTCCCTCTTAGAGGTAAA 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589286268181600