Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq64647 98.7 1e-15
seq7011 89.7 6e-13
seq941051 84.2 3e-11
>seq64647
Length=8232
Score = 98.7 bits (108), Expect = 1e-15
Identities = 233/352 (66%), Gaps = 0/352 (0%)
Strand=Plus/Plus
Query 14430 TGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGTGAAG 14489
|||| ||||| || ||||||| | || || | | || || ||||| |||||||
Sbjct 7833 TGAAAGTGGCTCAGCTGGCGGGCAGCATTGCAGAACACACCGCCTATCACCACGGTGAAG 7892
Query 14490 TATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATTA 14549
| ||| | | ||| ||||| || |||| | ||| | || || |||||||| |
Sbjct 7893 TGTCCCTCATGTCCACTATTGTCAACCTGGCCCAGAACTTCGTTGGCTCCAACAACATCA 7952
Query 14550 ACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTAAGGATGCTTCTC 14609
|| |||| | || |||||| || ||||||||||||||||| || || || || |
Sbjct 7953 ACGTTCTGCAGCCCATTGGTCAGTTCGGTACGCGTCTCATGGGCGGAAAAGACTCTGCGA 8012
Query 14610 AGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGATCTTTGATCCTCGGG 14669
| | ||||||||||| || || | |||| | | || || |||||| |
Sbjct 8013 GTTCTCGTTACATTTTCACCAAGCTGTCTCCTCTCGCTCACCACATTTTCCATCCTCAAG 8072
Query 14670 ATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTCCATTGAACCAGACTTTTACA 14729
|| |||| | |||||||| ||| |||| || | || || || || | ||||
Sbjct 8073 ATAACCCTCTTCTCAACTATTTGAACGAAGACAATCAAAAAATCGAGCCCGAGTATTACG 8132
Query 14730 TGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTATCGGTACGGG 14781
|||| | ||||||||||| || ||||| ||||||| || || || ||
Sbjct 8133 TGCCTGTCATCCCAATGGTTCTTGTCAATGGCGCCGAGGGCATTGGCACTGG 8184
>seq7011
Length=120798
Score = 89.7 bits (98), Expect = 6e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160
|| ||||| ||||| ||||||||||| ||| | | || | ||| |||||||||| ||
Sbjct 26922 GTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGC 26981
Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220
|| ||||| ||||| |||| || || ||||| ||||| || ||||| ||||||
Sbjct 26982 CTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATCTCCCGGGACGAGGGGCTCCACACC 27041
Query 65221 GAGTTTGCC 65229
|| ||||||
Sbjct 27042 GACTTTGCC 27050
>seq941051
Length=452
Score = 84.2 bits (92), Expect = 3e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 13541 TCCAAAATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCT 13600
|||||| | | || ||||| ||| | || ||||| ||| | || || || |||
Sbjct 191 TCCAAACTGAAGGGCATTCCAAAGCTCGAGGACGCCAACGATGCTGGCACACGCTTCTCT 132
Query 13601 GGAAAGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGT 13660
||||||| ||||| | |||||||| || || || || ||||| || || || |||
Sbjct 131 TCTGAGTGTACGCTCATCTTGACAGAGGGAGACTCAGCCAAGACCCTGGCAGTAGCAGGT 72
Query 13661 CTCTCTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAA 13711
|| ||| ||||||||||| | ||||| || ||||| ||| | ||||||
Sbjct 71 CTTGGTGTTGTTGGTCGTGACAAATACGGAGTCTTCCCTCTTAGAGGTAAA 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589286268181600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |