Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq31263 86.0 2e-11 seq3070 86.0 2e-11 >seq31263 Length=61576 Score = 86.0 bits (94), Expect = 2e-11 Identities = 102/138 (74%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | || ||| || |||||| |||||||||| |||||||| ||||| || || Sbjct 27245 AATTTCCTTAAGACGCGGCACACCAAGGGTTACGTT---CTTGGACGACACACCGGCGAA 27189 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 |||||||| || || || | ||||| | ||||| || | ||| || || || | Sbjct 27188 ATGGAAAGTGTTGAGCGTCATCTGAGTTGCAGGCTCCCCGAGACTCTGGGCGGCGAGGGG 27129 Query 301935 ACCAACCATTTCTCCTGG 301952 ||| ||||||||||| || Sbjct 27128 ACCTACCATTTCTCCAGG 27111 >seq3070 Length=111036 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || ||||| || ||| ||||| || | ||||| ||||||| ||||| || || Sbjct 47647 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 47588 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 || | |||||| || |||||||| || ||||| |||||||||||||||| ||| Sbjct 47587 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCCACCTG 47531 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || ||||| || ||| ||||| || | ||||| ||||||| ||||| || || Sbjct 89569 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 89510 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 || | |||||| || |||||||| || ||||| |||||||||||||||| ||| Sbjct 89509 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCCACCTG 89453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1453399414836215