Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq15761 131 2e-24 seq7011 123 3e-22 >seq15761 Length=59039 Score = 131 bits (144), Expect = 2e-24 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 1592171 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGC 1592230 || ||| | || || |||||||||||||||||||||||| || | || | ||| Sbjct 39009 TTCGAGCTCATTCTTGCCGCCAACTACCTCGACATCAAGGGATTGTTGGACGTGACCTGC 38950 Query 1592231 AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAAC 1592290 ||| | || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 38949 AAGACCGTCGCCAACATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAAC 38890 Query 1592291 ATCAAGTACG 1592300 |||||| ||| Sbjct 38889 ATCAAGAACG 38880 >seq7011 Length=120798 Score = 123 bits (136), Expect = 3e-22 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||| | |||||||| |||| ||||||||||| |||||||||||| Sbjct 27031 CCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCGCGCTTC 26972 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| ||||||| | ||| || ||||||||||| ||||| || ||||||||| Sbjct 26971 TTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAAAAGATTCCCTCAACTGCGGCAAAG 26912 Query 869300 CCGATGAGCCGCTCGGCAAAG 869320 |||||| |||||| ||| || Sbjct 26911 GCGATGATCCGCTCCGCATAG 26891 Score = 107 bits (118), Expect = 2e-17 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 || ||| || ||||||| ||||||||||||||||| ||||||| || ||||||||| Sbjct 28512 CGTGAGGAGATGGTCGGCCACAAACTCGATGTACTGCTTCATGAGGTCGCAGTTCATGCC 28453 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC--- 868923 ||| ||||||||||| |||| ||| ||| ||||| | |||||||| || || || Sbjct 28452 GATAAGCGCCACCGGAAGCGCCTCTGTCAGGAACTCCTGCTCGATCTTTACAGCTTCTCT 28393 Query 868924 GACGATGATC 868933 ||||||| || Sbjct 28392 GACGATGCTC 28383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6026987034437315