Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq15761 127 3e-23 seq83789 109 9e-18 seq9383 109 9e-18 seq7011 109 9e-18 seq27360 100 4e-15 seq14020 95.1 2e-13 seq6629 91.5 2e-12 seq3070 87.8 3e-11 seq487720 86.0 1e-10 seq31263 86.0 1e-10 seq1871 86.0 1e-10 >seq15761 Length=59039 Score = 127 bits (140), Expect = 3e-23 Identities = 122/155 (79%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 2035607 TTGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACAT 2035666 |||| |||| || ||| || | || ||| | || || |||||||||||||||||||| Sbjct 39033 TTGC-AGGTGGATCAAGGAACTTTGTTCGAGCTCATTCTTGCCGCCAACTACCTCGACAT 38975 Query 2035667 CAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCC 2035726 |||| | | || || ||||||||||| |||||| | |||||||||||||| || Sbjct 38974 CAAGGGATTGTTGGACGTGACCTGCAAGACCGTCGCCAACATGATCAAGGGCAAGTCCCC 38915 Query 2035727 CGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 |||||| |||||||||||||| ||||||||| ||| Sbjct 38914 CGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 38880 >seq83789 Length=2236 Score = 109 bits (120), Expect = 9e-18 Identities = 171/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| || || || ||||||||| | |||||||| || ||| Sbjct 512 TGTACTTTGTGACGGCCTTGGTTCCTTCAGAAACGGCGTGCTTCGCCAGTTCACCAGGCA 571 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || ||||| ||||| || | |||||| | | |||||| || | Sbjct 572 GCAAAAGCCTTACAGCAGTCTGTATCTCCCGAGAAGTGATCGTTGTTCTCTTGTT-GTAC 630 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||| | || || ||| | || | |||| ||||||||||| || || ||| Sbjct 631 TGGGCCAATCTTGAAGCTTCAGTGGCAATTCTCTCGAAAATGTCGTTGACGAAAGAATTC 690 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | ||| | || | || || ||||| || ||||| |||||||| Sbjct 691 ATGATGGACATGGCCTTGCTTGATACTCCAGTATCAGGGTGGACTTGCTTCAGCACCTTA 750 Query 1485709 TA 1485710 || Sbjct 751 TA 752 >seq9383 Length=108990 Score = 109 bits (120), Expect = 9e-18 Identities = 172/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||||||||| || || || || || ||||| | |||||||| || | | Sbjct 89797 TGTACTTTGTGACGGCCTTTGTTCCTTCAGAAACTGCGTGTTTTGCCAGTTCACCAGGAA 89856 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || || || || |||| | ||| || | | |||||| || | Sbjct 89857 GCAGAAGCCTCACAGCAGTTTGAATTTCCCGGGAGGTGATAGTTGTCCTCTTGTT-GTAC 89915 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||| | || ||||| | ||||| || | |||||||||||||| || ||| Sbjct 89916 TGAGCCAATCTTGAAGCTTCGGTAGCAATGCGTTCAAAAATGTCGTTGACAAAAGAATTC 89975 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | ||| | || | || || |||||||||||||| | |||||| Sbjct 89976 ATGATAGACATTGCCTTGCTCGACACACCAGTATCAGGGTGCACCTGCTTCAAGACCTTG 90035 Query 1485709 TAAA 1485712 |||| Sbjct 90036 TAAA 90039 >seq7011 Length=120798 Score = 109 bits (120), Expect = 9e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||| | |||||||| ||| ||||||||||| |||||||||||| Sbjct 27031 CCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCGCGCTTC 26972 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||||| ||| || ||||||||||| ||||| || ||||||||| Sbjct 26971 TTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAAAAGATTCCCTCAACTGCGGCAAAG 26912 Query 794461 CCGACGAGCCGCTCGGCA 794478 ||| || |||||| ||| Sbjct 26911 GCGATGATCCGCTCCGCA 26894 Score = 95.1 bits (104), Expect = 2e-13 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGG-TGGTC 794573 ||||| |||||||| ||| | | |||||| || ||||||||| ||||| | ||| Sbjct 25781 GCCCAGTCTGCCTTCTTCTTAATACAGGGCATGGTCTCGATGGCGTTGAAGAGTCTCGTC 25722 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 | |||| | | ||| ||||||||||| ||| || || ||| |||| ||||| || Sbjct 25721 -TGCTCGGCGGTGTCGGAGACGTAGGTGTTGATCAGCAGACTGTACATCTCGGAGTGAAT 25663 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| || |||||||||||||| || || |||||| Sbjct 25662 GTTCTCCATGGCGATCTGGAACCCGTAGAAGCAG 25629 >seq27360 Length=31183 Score = 100 bits (110), Expect = 4e-15 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| || || || |||||||| | |||||||| || | | Sbjct 17079 TGTACTTCGTGACGGCCTTGGTTCCTTCAGAAACGGCGTGTTTCGCCAGTTCACCAGGAA 17138 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || || ||||| || | | ||| || | | ||||| Sbjct 17139 GCAAAAGCCTCACAGCAGTTTGAATCTCTCGAGAGGTGATAGTTGTCCTTTTGTTGTATT 17198 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | || ||||| | ||||| |||| |||||||| ||||| || |||| Sbjct 17199 GAGCCAATCTTGAAGCTTCGGTAGCAATGCGTTCGAAAATGTCGTTTACAAAAGAATTCA 17258 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| | || | || || || || |||||||| | ||||||| Sbjct 17259 TGATGGACATGGCCTTGCTCGACACACCAGTATCAGGATGGACCTGCTTCAAGACCTTGT 17318 Query 1485710 AAA 1485712 ||| Sbjct 17319 AAA 17321 >seq14020 Length=93898 Score = 95.1 bits (104), Expect = 2e-13 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||| ||||| || || || || || ||||| | |||||||| || | | Sbjct 47004 TGTACTTTGTGACTGCCTTTGTTCCTTCAGAAACTGCGTGTTTCGCCAGTTCACCAGGAA 46945 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || || || || || | | || || | | |||||| || | Sbjct 46944 GCAAAAGCCTCACAGCAGTTTGAATTTCCCGAGAGGTAATAGTAGTCCTCTTGTT-GTAC 46886 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||| | | ||||| | ||||| |||| |||||||||||||| || ||| Sbjct 46885 TGAGCCAACCTAGAAGATTCGGTAGCAATGCGTTCGAAAATGTCGTTGACAAAAGAATTC 46826 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | ||| | || | || |||||||| |||||||| | |||||| Sbjct 46825 ATGATTGACATAGCCTTGCTAGACACACCAGTATCGGGGTGGACCTGCTTCAAGACCTTG 46766 Query 1485709 TAAA 1485712 |||| Sbjct 46765 TAAA 46762 >seq6629 Length=166680 Score = 91.5 bits (100), Expect = 2e-12 Identities = 170/246 (69%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || ||||| || || | || || |||||||| | ||||| || || | | Sbjct 36777 TGTACTTTGTAACGGCATTTGTTCGTTCAGAAACGGCGTGTTTCGCCAGCTCACCAGGAA 36718 Query 1485530 TGATCAGGCGCACGGCGGTCTGGA-TCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG 1485588 | || | ||| || || || | |||| || | | |||||| | | ||| || || Sbjct 36717 GCAAAAGCCTCACAGCTGTTTGAAATCTCCCGAGAGGTGATCGTTGTCCTCTTATT-GTA 36659 Query 1485589 C-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | |||| || || |||| | ||||| |||| ||||| || ||||| || || Sbjct 36658 CTGAGCCAATCGTGAAGCTTCGGCAGCTATGCGTTCGAAAATGTCATTCACAAAAGAATT 36599 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| | || | || |||||||| |||||||| || ||||| Sbjct 36598 CATGATGGACATGGCCTTGCTAGACACACCAGTATCGGGGTGGACCTGCTTCAGAACCTT 36539 Query 1485708 GTAAAC 1485713 |||||| Sbjct 36538 GTAAAC 36533 >seq3070 Length=111036 Score = 87.8 bits (96), Expect = 3e-11 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 2069617 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGC-CTC 2069675 || ||||| ||| || || || |||||||||||||| ||| | ||||| | || ||| Sbjct 50588 AATTCGCCGCTGAGGACCCGACGTGTGTAGATGTTGCTGGTGTAGGCCTCG-ATGCTCTC 50530 Query 2069676 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTT 2069735 | |||||||||||||||| | || | ||| || |||||| |||||| ||||| ||| Sbjct 50529 GTTGTTGCCCAGGATCTGTGCGGTGGAGGCGGTAGGCATGGGCGCCAGCAGCAGGCTGTT 50470 Query 2069736 GCGCA 2069740 ||||| Sbjct 50469 GCGCA 50465 >seq487720 Length=269 Score = 86.0 bits (94), Expect = 1e-10 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||||||||| || || || |||||||| | |||||||| ||| | | Sbjct 65 TGTACTTTGTGACGGCCTTGGTTCCTTCAGAAACGGCGTGTTTCGCCAGTTCACCGGGAA 124 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || || || || || | | ||| || | | ||||| Sbjct 125 GCAAAAGCCTCACAGCAGTTTGAATTTCTCGAGAGGTGATAGTTGTCCTTTTGTTGTATT 184 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | || ||||| | ||||| |||| |||||||| ||||| || |||| Sbjct 185 GAGCCAACCTTGAAGCTTCGGTAGCAATGCGTTCGAAAATGTCGTTTACAAAAGAATTCA 244 Query 1485650 TGATCGACAT 1485659 |||| ||||| Sbjct 245 TGATGGACAT 254 >seq31263 Length=61576 Score = 86.0 bits (94), Expect = 1e-10 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 429627 GGTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGC 429686 ||||| || ||||| | |||||| |||| || | ||||||||||| ||||||||| Sbjct 20393 GGTCG-ACATTCCGTATGAACCTGTCCGTAACATCGCCATACAACGCCGATTTTGACGGC 20451 Query 429687 GACGAGATGAACCTGCACGTGCCCCAG 429713 ||||||||||||||||||||||| ||| Sbjct 20452 GACGAGATGAACCTGCACGTGCCACAG 20478 >seq1871 Length=224320 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1812783 TGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGAT 1812842 ||||||||| ||||||| ||| ||||| || || ||||| || |||||||||||||||| Sbjct 1224 TGCCTCGGTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAT 1283 Query 1812843 CCTCACCCGAGGTATAT 1812859 |||||| || || |||| Sbjct 1284 CCTCACTCGGGGCATAT 1300 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1812783 TGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGAT 1812842 ||||||||| ||||||| ||| ||||| || || ||||| || |||||||||||||||| Sbjct 131863 TGCCTCGGTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAT 131922 Query 1812843 CCTCACCCGAGGTATAT 1812859 |||||| || || |||| Sbjct 131923 CCTCACTCGGGGCATAT 131939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7812350898144105