Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 95.1 1e-14
>seq6977
Length=186913
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || ||||| | || ||||| ||||| ||| ||||| || |||
Sbjct 62540 ATGCAAATCTTCGTAAAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCA 62599
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | ||||| |||||| ||||| ||||| | ||| ||||||
Sbjct 62600 GACACCATAGAAAATGTAAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGATCAG 62659
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | || || || ||||| || || | || || | ||||||||
Sbjct 62660 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAAT 62719
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| ||||||||||| || ||||| ||||| || | ||||||| ||
Sbjct 62720 ATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGG 62766
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAA-ACGGAGGCTGG 107614
||||||||||| ||||| || | || ||||| ||||| ||| ||||| || || || |
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| ||| | || ||| ||||||| || || |||||| | ||| || ||
Sbjct 62372 -GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCA 62430
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|| | ||||||| || ||||| ||| |||| |||| | || | ||||||| ||
Sbjct 62431 ACAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAA 62490
Query 107735 CATTCAAAAGGAGTCTAC 107752
|||||||| || |||||
Sbjct 62491 TATTCAAAAAGAATCTAC 62508
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| |||||| |||| || || || || ||| | ||| || |||
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | ||||| || ||| ||||| |||||| | || || |||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | ||| || |||||| |||| |||| || || | ||||||||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||||||||| || || | ||| ||||| || | | ||||| ||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCTGCGTCTTCGAGGCGG 61425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394128781852855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |