Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6977 141 9e-29 seq7011 111 2e-19 seq3070 98.7 9e-16 seq23011 82.4 7e-11 >seq6977 Length=186913 Score = 141 bits (156), Expect = 9e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || |||||||| ||||||||||| | ||| | | | || || |||| Sbjct 62971 ATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCA-TCTTCCAGCT 62913 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | ||||| |||||||||||||| || |||||||||||||| ||||| Sbjct 62912 GTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCT 62853 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| | || || || |||| ||||| ||| ||||| | Sbjct 62852 TAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCAG 62793 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||||||||| Sbjct 62792 TCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 134 bits (148), Expect = 1e-26 Identities = 155/207 (75%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| || |||||||| ||||||||||| | || ||| |||||| || Sbjct 60946 ATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAGAGGGT--ACGTCCGTCCTCCAGT 60889 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | ||||| |||||||||||||| || |||||||||||||| |||| Sbjct 60888 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATC 60829 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||||| ||||| | || || || |||| |||| ||| ||||| Sbjct 60828 TTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCA 60769 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||| ||||||||| Sbjct 60768 GTTAGGGTTTTCACGAAGATCTGCATG 60742 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| ||||||||||| || ||| ||| ||| || | | Sbjct 61630 ATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACC-GTCTTCCAATT 61572 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || |||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct 61571 GCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCT 61512 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | |||| ||||| | | ||| || || | ||| | || ||||||| Sbjct 61511 TTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGG 61452 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || || || |||||||| |||||| Sbjct 61451 TGAGGGTCTTAACGAAAATTTGCATG 61426 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| |||||||| || | ||| | | | || || |||| Sbjct 61174 ATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGTGCGGCCA-TCTTCCAGCT 61116 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| || ||||| |||||||| || || |||||||| || ||||| Sbjct 61115 GCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGGATCT 61056 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| || || | || ||| || || | ||||| ||| ||||||| Sbjct 61055 TAGCCTTCACATTTTCAATAGTATCAGAGGCCTCGACTTCAAGGGTGATGGTCTTGCCGG 60996 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| |||||||| Sbjct 60995 TGAGGGTCTTCACGAAGATCTGCAT 60971 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||||| ||||| |||||||| || | ||| | | | || || || Sbjct 63201 AAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGGCCA-TCTTCCAG 63143 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || | ||||| |||||||||||||| || || |||||||| || ||| Sbjct 63142 CTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTCCTTATCCTGGAT 63083 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | |||| || || | || ||| || || | ||||| |||||||| Sbjct 63082 CTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGTGATTGTTTTGCC 63023 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || ||||| |||||||| Sbjct 63022 GGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || |||||||| || || || ||| | || || || Sbjct 62745 AAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCA-TCTTCAAG 62687 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || |||||||| ||||| || || |||||||| || ||| Sbjct 62686 CTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCTTCCTTATCCTGGAT 62627 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | || | ||||| | | || || |||| ||||| ||| ||||| Sbjct 62626 CTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTCTTGCC 62567 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||||||||| || ||||| Sbjct 62566 AGTGAGTGTTTTTACGAAGATTTGCAT 62540 Score = 111 bits (122), Expect = 2e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| || ||||| || || ||||| || || ||| ||| || ||| Sbjct 62289 AAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTCAAGC 62230 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || || ||||| |||||||| || |||||||| ||||| ||| Sbjct 62229 TGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCC-TGAAT 62171 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || || | | ||||| ||| || | || ||||| || | || | || ||||| Sbjct 62170 TTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGCC 62111 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||| ||||| ||||||||||||||| Sbjct 62110 GGTCAGGGTTTTCACGAAAATCTGCATG 62083 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || |||||||| || || || ||| | || || || Sbjct 61860 AAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCA-TCTTCAAG 61802 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || ||||| |||||||| || || |||||||| || ||| Sbjct 61801 CTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGGAT 61742 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | |||| ||||| | | ||| || || | ||||| || || || Sbjct 61741 CTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGACTTCCAGGGTGATTGTCTTTCC 61682 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || |||||||| ||||| Sbjct 61681 GGTGAGGGTCTTCACGAAAATTTGCAT 61655 Score = 100 bits (110), Expect = 3e-16 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 ||||| || || || |||||||| || || || |||| ||| || | ||| |||| Sbjct 61395 GTGGATTCCTTTTGAATATTGTAGTCAGACAGGGT--ACGACCGTCTTCCAACTGTTTGC 61338 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||||||||||| ||||| ||||||||||| || ||| ||| || Sbjct 61337 CAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCT-TGAATTTTAGCC 61279 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | ||||| ||||| | | || || || | ||||| || || ||||| ||| Sbjct 61278 TTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTCTTACCGGTTAGA 61219 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || ||||||||||| Sbjct 61218 GTTTTAACAAAAATCTGCAT 61199 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| || ||||| || ||||| || || | || | | || ||| || | | Sbjct 62515 ATGGAGGGTAGATTCTTTTTGAATATTATAGTC--CGATAGAGTGCGGCCGTCTTCCAAC 62458 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| |||| || || || |||||||| || |||||||||||||| ||| Sbjct 62457 TGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATC 62398 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| |||| | || | || || | || || || |||| ||||| ||| ||||| Sbjct 62397 TTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTGCCA 62338 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| ||||| Sbjct 62337 GTGAGGGTCTTGACGAAAATTTGCAT 62312 >seq7011 Length=120798 Score = 111 bits (122), Expect = 2e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||| || |||||||| || || || ||||||||||| || ||| Sbjct 27055 AGGCAGGCAAAGTCGGTGTGGAGCCCCTCGTCCCGGGAGATAAGCTCGTTGCTGAAGGTC 26996 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||| | ||| | |||| | |||| |||| ||| ||| || || || Sbjct 26995 AGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGACCCGGAGAAA 26936 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGC 120800 || | ||||| || ||||||||||| || ||||| || Sbjct 26935 AAGATTCCCTCAACTGCGGCAAAGGCGATGATCCGCTCCGC 26895 >seq3070 Length=111036 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 148865 GTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATT 148924 |||||| || || || | ||| || ||| ||||||||| ||| | |||| |||||| Sbjct 47647 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 47588 Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTG 148981 |||||||| ||| ||||||||||||||||||||||| || || || |||||||| Sbjct 47587 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCCACCTG 47531 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 148865 GTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATT 148924 |||||| || || || | ||| || ||| ||||||||| ||| | |||| |||||| Sbjct 89569 GTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGTGCCTAGATTCTGTTGATT 89510 Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTG 148981 |||||||| ||| ||||||||||||||||||||||| || || || |||||||| Sbjct 89509 GCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGTTCCTGTCTCCACCTG 89453 >seq23011 Length=82770 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||||||||| || || | || || ||||| || || || || || ||||||||| Sbjct 77568 TCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACCTTCCTTG 77627 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| || | | |||| || || | | |||||| || | ||||| | Sbjct 77628 TCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAGGGTGATG 77687 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || ||||| ||||| |||||||| Sbjct 77688 GTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 77722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477518866521800