Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6977 113 3e-20 >seq6977 Length=186913 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||||||||| |||||| || || || |||||||| |||||||| || || Sbjct 62311 ACCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGA 62252 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| |||| || | || || ||||| || |||| |||||| || || | || Sbjct 62251 CAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| ||| |||| || | || || | ||||| Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCCTTC-ACATTCTCAATCGTATCCGAGGCTTCCA 62133 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || ||||| || || || | ||||| || || |||||||| Sbjct 62132 CTTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || || |||||||| ||||| || ||| |||| |||| ||| || || ||||| Sbjct 60933 TCTTTCTGGATATTGTAATCAGAGAGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAG 60874 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| || | || | ||||| ||||| || || |||| | | Sbjct 60873 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTCA-CGTT 60815 Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| |||||| | ||| || || | |||||| || || || |||| ||||| || Sbjct 60814 CTCAATGGTGTCAGAGGCTTCAACTTCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCAC 60755 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 60754 GAAGATCTGCAT 60743 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| || ||| | |||||| || || ||| ||| ||||| || ||||| || || Sbjct 62767 ACCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGA 62708 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || || | || || ||||| || || | |||||||||||| | || Sbjct 62707 CAAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGG 62648 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || || || || | |||| || | |||||| | ||| | Sbjct 62647 AATACCTTCCTTATCCTGGATCTT-TGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGA 62589 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | |||||||| ||||| |||||| Sbjct 62588 CTTCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCATA 62539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324791281694400