Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq6977 107 4e-18 >seq6977 Length=186913 Score = 107 bits (118), Expect = 4e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| ||||||| || ||| ||||| | ||| Sbjct 61670 AAGACCCTCACCGGAAAGACAATCACCCTGGAAGTCGAGGCTTCGGACACCATTGAAAAC 61729 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| || || || ||||| ||| || ||| || | ||||||||| Sbjct 61730 GTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAACAGCGTCTTATCTTC 61789 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||| | |||||| | || ||||| |||| || ||||| Sbjct 61790 GCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAATATCCAAAAGGAGTCC 61849 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || ||| | || || | || ||| Sbjct 61850 ACCCTGCACTTGGTGCTGCGTCTGCGA 61876 Score = 107 bits (118), Expect = 4e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || ||||| | ||||| ||| ||| ||||| | ||| Sbjct 62555 AAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCAGACACCATAGAAAAT 62614 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||| || || || ||||| ||| || || || | ||||||||| Sbjct 62615 GTAAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGATCAGCAGCGTCTTATCTTC 62674 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||| | |||||| | || ||||| |||| || ||||| Sbjct 62675 GCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAATATCCAAAAGGAGTCC 62734 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || ||| | || || | || ||| Sbjct 62735 ACCCTGCACTTGGTGCTGCGTCTGCGA 62761 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || ||||| |||||||| ||| ||| ||| Sbjct 61202 CAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCAGAC 61261 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| || |||||||| || ||||| ||| || ||| || Sbjct 61262 ACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAGCAG 61321 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| || || || ||||||||||| || | || || | || ||||| | Sbjct 61322 CGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAATATT 61381 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || || ||||||||| | || || | |||||| Sbjct 61382 CAAAAGGAATCCACTCTTCACTTGGTGCTGCGTCTTCGA 61420 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| | ||||| ||| || || || ||||| Sbjct 62326 CAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCGGATACCATCGAAAA 62385 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || |||||||| |||||| || || ||||| ||| || ||| ||| | ||||| | Sbjct 62386 CGTCAAAGCAAA-GATTCAGGACAAGGAAGGCATTCCCCCCGACCAACAACGTCTTATTT 62444 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 ||||||| |||||||||||||| || | ||| | | || || || | || ||||| | Sbjct 62445 TCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAATATTCAAAAAGAAT 62504 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||| || || ||||| | || ||||| Sbjct 62505 CTACCCTCCATCTTGTCCTCAGGCTTCG 62532 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || ||||| ||| | ||||||||| || || || | || Sbjct 62099 AAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTCGGATACGATTGAGAAT 62158 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || |||||||| ||| || ||| || | || |||||| Sbjct 62159 GTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCAACAGCGTCTGATCTTC 62218 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||| || | || ||| | || |||||| | || ||||| || Sbjct 62219 GCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAACATTCAAAAAGAATCG 62278 Query 206365 ACTCTTCAC 206373 || |||||| Sbjct 62279 ACCCTTCAC 62287 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| || | || || | ||| || || ||||| || |||| ||| ||||| | |||||| Sbjct 61876 TCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGT 61817 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||| |||||||| |||||||||||||| || ||||| Sbjct 61816 ACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTG 61772 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || ||||| | || || ||||| || || |||||||||| ||| ||||| | | || Sbjct 61191 CGCAGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGTG 61132 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||||||||||||||| |||||||| ||||| || ||||| Sbjct 61131 CGGCCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTG 61088 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| || | || || | ||| || || ||||| || |||| ||| ||||| | |||||| Sbjct 62761 TCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGT 62702 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| |||||||| |||||||||||||| || || ||| Sbjct 62701 ACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGA 62656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1167031607151095