Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6977 109 5e-19 >seq6977 Length=186913 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || |||||||||||||| || | |||||| || |||| || ||||||||||| || || Sbjct 62274 TCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAG 62215 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 |||| ||||| ||||| | |||| || || |||||| ||| ||| | ||||| | | Sbjct 62214 ATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCC-TGAATTTTAGCCTTCACATT 62156 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | |||||| || | || ||||| || || |||| |||||||| Sbjct 62155 CTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCAC 62096 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 62095 GAAAATCTGCAT 62084 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| ||||| || | || ||| || |||| |||| ||| || || ||||| Sbjct 61389 TCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAG 61330 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 || | ||||||||||| | ||||| || ||||| | | ||| ||| | ||| | | | Sbjct 61329 ATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTAT-CTTGAATTTTAGCCTTTACATT 61271 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||| || |||| ||||| || ||||| || | |||||| || Sbjct 61270 CTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAAC 61211 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 61210 AAAAATCTGCAT 61199 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||| | ||| | ||| | ||| || || || || |||||||| | Sbjct 60969 CCGCCACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAG 60910 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| ||||| ||||| || ||||| || | ||||||||||| | ||| Sbjct 60909 AGGGTACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGA 60850 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||||| | | | ||||| | ||| || Sbjct 60849 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACT 60790 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||| || || || || | |||||||| || |||||||| Sbjct 60789 TCGAGCGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCAT 60743 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || |||||||| | || |||||| || || ||||| || | Sbjct 63222 CCACCGCGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 63163 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || |||||||| || || ||||| || | ||||||||||| | ||| Sbjct 63162 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 63103 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| ||||||| ||||| | || | | || || | || ||| Sbjct 63102 ATACCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACC 63043 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| ||||| || || | || ||||| || |||||||| Sbjct 63042 TCAAGGGTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||| | ||| | ||| | || || || || || |||||||| | Sbjct 62994 CCGCCACGCAGCCTAAGCACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAG 62935 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || |||||||| || || ||||| || | ||||||||||| | ||| Sbjct 62934 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGA 62875 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||||| | | | ||||| | ||| || Sbjct 62874 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACT 62815 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || |||| ||||| || || |||||||| Sbjct 62814 TCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| |||||||| | || || || |||| |||| ||||| || ||||| Sbjct 61617 TCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCCAATTGCTTGCCGGCAAAA 61558 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||| | | ||||||||| ||||||| ||||| | || Sbjct 61557 ATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTT 61498 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || |||| || || || || || || | || || || Sbjct 61497 TCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTAACG 61438 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 61437 AAAATTTGCAT 61427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || | ||| | || | ||| ||||||||| || |||||||| | Sbjct 62082 CCACCACGCAGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAG 62023 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || |||||||| || || ||||| || | ||||||||||| | ||| Sbjct 62022 AGGGTACGACCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGA 61963 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660 | || ||||||||| |||||| ||||| Sbjct 61962 ATGCCTTCCTTGTCCTGGATCTTAGCCTTCA 61932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445290001810600