Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6977 149 6e-31 seq4196 84.2 2e-11 >seq6977 Length=186913 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| ||| | ||| || ||||||||||||||||| |||||||| Sbjct 61425 CCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGAC 61366 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| || | ||||||||| ||||| || | ||||||||| || || || Sbjct 61365 AGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGA 61306 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||||||||| || || || | ||||| || | ||| || Sbjct 61305 ATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACT 61246 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || |||||||||| ||||||||| ||||| ||||| Sbjct 61245 TCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || | ||| | ||| || || ||||| ||||||||||||||||| | | Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | ||| || ||||| || || || || |||| |||||| || ||||| || Sbjct 62250 AA-GGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 62192 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| || |||||||| || || || | || || || | |||||| Sbjct 62191 AATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCAC 62132 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| || || ||||| | ||||| |||||||| ||||| Sbjct 62131 TTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 62084 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||||| || |||| ||| | ||| || ||||| |||||||| || |||||||| | | Sbjct 62766 CCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGAC 62707 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || || || ||||| ||||| || || || | ||||||||||||||| || Sbjct 62706 AAAG-TACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGG 62648 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || ||| || || || | ||||| || | ||| || Sbjct 62647 AATACCTTCCTTATCCTGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGAC 62588 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | ||||| ||||| |||||||| Sbjct 62587 TTCGAGGGTGATGGTCTTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||||||||| ||||| ||||| || | ||| || ||| || Sbjct 61635 ACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGACCGTCTTCC 61576 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | || ||||| |||||||| | ||||||||| ||||| || || ||||| || || || Sbjct 61575 AATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 61516 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || || | ||||| || | || || || || ||||| || || Sbjct 61515 ATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTAATAGTCTTG 61456 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || ||||||||||||||||| Sbjct 61455 CCGGTGAGGGTCTTAACGAAAATTTGCAT 61427 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||||| || |||| ||| | ||| || ||||| |||||||| || |||||||| | | Sbjct 61881 CCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGAC 61822 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || || || ||||| ||||| || || || | |||||| || ||||| || Sbjct 61821 AAAG-TACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGG 61763 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCA 134664 || ||||| || || || || ||| || || | | ||||| |||| || | || | Sbjct 61762 AATACCTTCCTTATCCTGGATCTTTGCCTTCAC-GTTTTCAATGGTGTCCGAAGCCTCGA 61704 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || || ||||| | || || |||||||||||||| Sbjct 61703 CTTCCAGGGTGATTGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| || || || || ||||| || || || ||||| || | |||| | || || Sbjct 62977 CACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCTTC 62918 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||||||||| ||||| || | ||||||||| ||||| || |||||||| || || || Sbjct 62917 CAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTG 62858 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || || || || | ||||| || | ||| || ||||| || ||||| || Sbjct 62857 GATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTT 62798 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | |||||||||||||| ||||| Sbjct 62797 GCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||||| || | || || ||||| ||||| || || |||||||| | Sbjct 63222 CCACCGCGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAA 63163 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||||||||| ||||| || | ||||||||| ||||| || Sbjct 63162 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGA 63103 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || ||| || || || | || || || | || || Sbjct 63102 ATACCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACC 63043 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| ||||| | || || ||||| || ||||| Sbjct 63042 TCAAGGGTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || ||||| |||||||| || ||||| | ||| | ||| || Sbjct 62520 ACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGGCCGTCTTCC 62461 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| || || || ||||| | ||| || || ||||| || |||||||| || || ||| Sbjct 62460 AACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGA 62401 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| |||||| || | || || || | ||| || ||||| || ||||| || Sbjct 62400 ATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTG 62341 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || |||||||||||||| Sbjct 62340 CCAGTGAGGGTCTTGACGAAAATTTGCAT 62312 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| | ||| ||||| || || || |||||||| || ||||| || | ||| || Sbjct 62073 AGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAGAGGGTACGA 62014 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||||||||| ||||| || | ||||||||| ||||| || |||||||| Sbjct 62013 CCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCC 61954 Query 134616 TTTTCTTGAATTTT 134629 || || || || || Sbjct 61953 TTGTCCTGGATCTT 61940 >seq4196 Length=56364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| |||||||| | | ||| || || || || || || ||||| Sbjct 9847 TCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCTTTA 9788 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||||||||| |||||| || | || || || | || || || || |||||| Sbjct 9787 TCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTAATG 9728 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || ||||| || | ||||| || || || ||||| ||| Sbjct 9727 GTCTTACCCGTGAGGGTTTTCACAAATATCTGCATGTTG 9689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499228148871400