Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 179 4e-40
seq64647 129 7e-25
seq7011 104 3e-17
seq4196 104 3e-17
seq32741 100 3e-16
>seq6977
Length=186913
Score = 179 bits (198), Expect = 4e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || ||||||||||||||||| || || || ||| |
Sbjct 61427 ATGCAAATTTTCGTTAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTAGAGGCTTCG 61486
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| |||| ||||||| || || ||||||||||| ||||| ||||| ||||||
Sbjct 61487 GACACCATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 61546
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || |||||| | || || | ||| || || | || || |||
Sbjct 61547 CAGCGTCTTATTTTTGCCGGCAAGCAATTGGAAGACGGTCGCACTCTGTCTGATTACAAT 61606
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||||||||| || ||||| ||| | | ||||| || ||
Sbjct 61607 ATTCAGAAGGAATCCACCCTCCATCTTGTCCTCAGGCTTCGTGGAGG 61653
Score = 176 bits (194), Expect = 5e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || |||||||| || || || |||||||| ||| |
Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAG 63115
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || ||||| || || || || || |||| || ||||| | ||||| |||
Sbjct 63116 CAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAT 63175
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| |||||||| ||| | || |||| || |||||||| ||
Sbjct 63176 ATCCAGAAGGAGTCCACTCTCCATTTGGTTCTGCGACTCCGCGGTGGCCA 63225
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || ||||| || ||| | |
Sbjct 60971 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTCGAGGCCTCT 61030
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| |||||||||| || ||||| ||||| || ||||| || |||||
Sbjct 61031 GATACTATTGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAA 61090
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||| || || ||||| || || |||| || || || | ||||| |||
Sbjct 61091 CAGCGTCTTATTTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACACTTTCGGACTACAAT 61150
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||| |||||||| || | | || || |||||
Sbjct 61151 ATCCAGAAAGAATCCACCCTTCATCTCGTGCTCAGACTGCGTGGTGG 61197
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || ||||| ||||| || || | || || || |
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | |||||||||||||| || ||||| || |||||||| ||||||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| || || | || || | ||||||||| | ||||| |||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||||||||||||||| | || |||||||||| || ||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCTGCGTCTTCGAGGCGG 61425
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || || |||||||| || || || || ||||| | |
Sbjct 60743 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACGCTCGAAGTTGAAGCCTCT 60802
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || |||||||||| || ||||||||||| || ||||| || ||||||
Sbjct 60803 GACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 60862
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| |||||||| ||||| | |||||||| | || || |||
Sbjct 60863 CAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGACGGACGTACCCTCTCTGATTACAAT 60922
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| || ||||| || || ||||| ||
Sbjct 60923 ATCCAGAAAGAATCTACCCTCCATCTTGT 60951
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || ||||||||||| ||||||||||| || || |
Sbjct 62084 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTCG 62143
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| |||||||||||||||||||||| || || ||||| || |||||
Sbjct 62144 GATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCAA 62203
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || |||||||| || || || | || ||| | ||||||| ||
Sbjct 62204 CAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAAC 62263
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||| ||||| || |||||
Sbjct 62264 ATTCAAAAAGAATCGACCCTTCA 62286
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || |||||||| || || || || || || |
Sbjct 62312 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62371
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | || || || |||||||||||||| || ||||| || |||||
Sbjct 62372 GATACCATCGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAA 62431
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| ||||| || |||||||| | || || | || || ||| | |||||||||
Sbjct 62432 CAACGTCTTATTTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACTCTATCGGACTATAAT 62491
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| || || ||||| ||| | | ||||| |||||
Sbjct 62492 ATTCAAAAAGAATCTACCCTCCATCTTGTCCTCAGGCTTCGTGGTGG 62538
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || || || |||||||| || || || || || || |
Sbjct 62540 ATGCAAATCTTCGTAAAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCA 62599
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| | ||||| || || ||||| ||||| || ||||| || || |||
Sbjct 62600 GACACCATAGAAAATGTAAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGATCAG 62659
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || || |||| |||||| | ||||||| |||
Sbjct 62660 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAAT 62719
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| ||||| || || | || ||||||| || || ||
Sbjct 62720 ATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGG 62766
Score = 134 bits (148), Expect = 2e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || || |||||||| || || || || || || |
Sbjct 62768 ATGCAGATTTTCGTTAAAACCCTGACTGGCAAGACCATCACCCTCGAAGTCGAAGCCTCG 62827
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || |||||||||| || ||||||||||| || ||||| || ||||||
Sbjct 62828 GACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 62887
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| || || || || |||| || ||||| | || || |||
Sbjct 62888 CAGCGTCTCATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAT 62947
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| || ||||| || || ||||| ||
Sbjct 62948 ATCCAGAAAGAATCGACCCTCCATCTTGT 62976
Score = 131 bits (144), Expect = 2e-25
Identities = 126/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530
||||| || |||||||||| || ||||||||||| || ||||| || |||||||||||
Sbjct 61921 CATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAGCAGCG 61980
Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCA 27590
||| || |||||||| || || || || |||| ||||||||| | || || ||| ||||
Sbjct 61981 TCTCATCTTTGCTGGCAAACAGCTGGAAGATGGTCGTACCCTCTCTGATTACAATATCCA 62040
Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||| || ||||| || || || | | || || |||||
Sbjct 62041 AAAGGAGTCTACTCTCCACCTTGTGCTCAGACTGCGTGGTGG 62082
>seq64647
Length=8232
Score = 129 bits (142), Expect = 7e-25
Identities = 176/244 (72%), Gaps = 4/244 (2%)
Strand=Plus/Plus
Query 32009 AGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACA--TGAAGGTGGCGCAGCT 32066
||||| ||| | | ||||| ||| ||| | | || || | |||| ||||| |||||
Sbjct 7791 AGGTGGTATTCACGTGCCTGAAGCGTAAC--GACAAGCGAGAGGTGAAAGTGGCTCAGCT 7848
Query 32067 GTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCAC 32126
| ||||| | | ||||| || || |||||||||||||| || | ||| ||| | |||
Sbjct 7849 GGCGGGCAGCATTGCAGAACACACCGCCTATCACCACGGTGAAGTGTCCCTCATGTCCAC 7908
Query 32127 CATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATC 32186
||||||||||| || |||||||| || || | || ||| | ||| | || ||||
Sbjct 7909 TATTGTCAACCTGGCCCAGAACTTCGTTGGCTCCAACAACATCAACGTTCTGCAGCCCAT 7968
Query 32187 TGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTT 32246
||| ||||| || || || ||| || || || || ||||||| || |||||||| ||
Sbjct 7969 TGGTCAGTTCGGTACGCGTCTCATGGGCGGAAAAGACTCTGCGAGTTCTCGTTACATTTT 8028
Query 32247 CACC 32250
||||
Sbjct 8029 CACC 8032
>seq7011
Length=120798
Score = 104 bits (114), Expect = 3e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| |||||| || || ||||| || || || ||||| ||| || || ||||||||
Sbjct 26910 GCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCCATCTTCTGGCTG 26969
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|| ||||| ||||||||||| || ||| | || |||||||| ||||| |||||||||
Sbjct 26970 AAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATCTCCCGGGACGAG 27029
Query 64846 GGGCTCCACCAAGAATTTGC 64865
||||||||| || |||||
Sbjct 27030 GGGCTCCACACCGACTTTGC 27049
>seq4196
Length=56364
Score = 104 bits (114), Expect = 3e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || || || ||||| ||||| || || |||||| |
Sbjct 9693 ATGCAGATATTTGTGAAAACCCTCACGGGTAAGACCATTACCCTAGAAGTTGAGGCTTCA 9752
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | || | |||||||| || || ||||| ||||| || |||||
Sbjct 9753 GATACTATCGAAAATGTCAAATCCAAAATTCAAGATAAAGAGGGTATTCCACCTGACCAA 9812
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
||| | || ||||||||||| ||||| || || ||||
Sbjct 9813 CAGAGGCTTATTTTTGCTGGCAAGCAGCTTGAAGATG 9849
>seq32741
Length=53758
Score = 100 bits (110), Expect = 3e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 32051 TGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGG 32110
|||| ||||| |||||| ||||| | | ||||| || || |||||||||||||| || |
Sbjct 39270 TGAAAGTGGCTCAGCTGGCGGGCAGCATTGCAGAACACACCGCCTATCACCACGGTGAAG 39211
Query 32111 CGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGA 32170
||| || | || ||||||||||| || |||||||| || || | || ||| | |
Sbjct 39210 TGTCCCTTATGTCTACTATTGTCAACCTGGCCCAGAACTTCGTTGGCTCCAACAACATCA 39151
Query 32171 ACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGA 32230
|| | || |||| ||| ||||| || || || ||| || || || || ||||||
Sbjct 39150 ACGTTCTGCAGCCCATTGGTCAGTTCGGTACGCGTCTCATGGGCGGAAAAGACTCTGCGA 39091
Query 32231 GCT 32233
|||
Sbjct 39090 GCT 39088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563347658548400
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