Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 143 2e-29
>seq6977
Length=186913
Score = 143 bits (158), Expect = 2e-29
Identities = 173/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||||| |||||||| |||||| || |||||| ||||||||||| || || || ||
Sbjct 61426 GCCGCCTCGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGA 61367
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || ||||||| | ||||| || ||||| || | |||||| ||||| || ||
Sbjct 61366 CAGGGTACGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGG 61307
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCC 34656
| || ||||| ||| ||| ||| | || || | ||| |||||| ||| ||
Sbjct 61306 AATGCCTTCCTTATCT-TGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCT-TCG 61249
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| ||| || || |||||||||| ||||| ||||||||||||||
Sbjct 61248 ACTTCCAAGGTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||||| |||||| || || ||| ||||||||| || || || |||||
Sbjct 61881 CCTCCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGAC 61822
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | |||||||| || || ||||| || || | |||||||||||| || ||
Sbjct 61821 AAAGTACGACCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGA 61762
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| || |||| |||| || ||| | ||| ||||| ||| ||
Sbjct 61761 ATACCTTCCTTATCCTGGATC-TTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGAC 61703
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || || || ||||| | || ||||| ||||| |||||
Sbjct 61702 TTCCAGGGTGATTGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | ||| | |||||| || || || || ||||||||||| || |||||
Sbjct 62310 CCACCTCTCAAACGTAGCACCAAGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGAC 62251
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || |||||||||| || |||||||| || || | |||||||||||| || ||
Sbjct 62250 AAGGTGCGGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 62191
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||| ||| | || || | ||| || || | |||||
Sbjct 62190 ATGCCTTCTTTGTC-CTGAATTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCAC 62132
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| | || ||||| || ||||| | |||||||| ||||||||||||
Sbjct 62131 TTCAAGAGTAATCGTCTTGCCGGTCAGGGTTTTCACGAAAATCTGCATG 62083
Score = 109 bits (120), Expect = 3e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| ||||||||||||||| |||||| || || || || || ||||| || ||
Sbjct 63213 AGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGG 63154
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || ||||| |||||||| || | |||||| ||||| || || | || |||
Sbjct 63153 CCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTCC 63094
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
|| || ||||||| || | | ||| || || | ||| || || | |||
Sbjct 63093 TTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGTG 63034
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| ||||| | || ||||| || ||||||||
Sbjct 63033 ATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 310983225549935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |