Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 187 2e-42
seq4196 93.3 4e-14
>seq6977
Length=186913
Score = 187 bits (206), Expect = 2e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| |||||||||||| | |||||||||||||||||| | ||
Sbjct 62083 CATGCAGATTTTCGTGAAAACCCTGACCGGCAAGACGATTACTCTTGAAGTGGAAGCCTC 62142
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| ||||||||| || || |||||||| |||||||||||||| || ||||| ||
Sbjct 62143 GGATACGATTGAGAATGTGAAGGCTAAAATTCAGGACAAAGAAGGCATTCCCCCCGACCA 62202
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||||| | || | |||||| || || | |||||| | ||| | || || |||||
Sbjct 62203 ACAGCGTCTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCCGCACCTTGTCAGACTACAA 62262
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||| || |||||| | || ||||| | |||||| | ||||| ||
Sbjct 62263 CATTCAAAAAGAATCGACCCTTCACTTGGTGCTACGTTTGAGAGGTGGTAT 62313
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| ||||| ||| | || || | ||||| ||| | ||
Sbjct 61199 ATGCAGATTTTTGTTAAAACTCTAACCGGTAAGACAATCACCTTGGAAGTCGAAGCTTCA 61258
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || ||||||||||| || |||||||| || || || ||
Sbjct 61259 GACACCATTGAGAATGTAAAGGCTAAAATTCAAGATAAGGAAGGCATTCCTCCTGACCAG 61318
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || |||||||| ||||||||| || ||| | || || |||||
Sbjct 61319 CAGCGTCTTATCTTTGCTGGCAAACAGTTGGAAGACGGTCGTACCCTGTCTGACTACAAT 61378
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || | || ||||| ||||| | || || |||||
Sbjct 61379 ATTCAAAAGGAATCCACTCTTCACTTGGTGCTGCGTCTTCGAGGCGGCAT 61428
Score = 132 bits (146), Expect = 4e-26
Identities = 154/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|| |||||| || || || || || || ||||||||| ||||||| || ||||| || |
Sbjct 61423 CGGCATGCAAATTTTCGTTAAGACCCTCACCGGCAAGACTATTACCCTGGAAGTAGAGGC 61482
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|| ||| | ||||| | || || ||| || || ||||| ||||| || || |||||
Sbjct 61483 TTCGGACACCATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCCGA 61542
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
|| |||||| | || | |||||||| |||||||||||| || || | || |||||
Sbjct 61543 CCAGCAGCGTCTTATTTTTGCCGGCAAGCAATTGGAAGACGGTCGCACTCTGTCTGATTA 61602
Query 27164 CAACATTCAAAAGGAGTCGACCTTACAT 27191
||| ||||| ||||| || ||| | |||
Sbjct 61603 CAATATTCAGAAGGAATCCACCCTCCAT 61630
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || |||||||| || || |||||| | || || || ||||| ||| | ||
Sbjct 62540 ATGCAAATCTTCGTAAAAACACTCACTGGCAAGACCATCACCCTCGAAGTCGAAGCTTCA 62599
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||| || || || || ||||| || || ||||||||
Sbjct 62600 GACACCATAGAAAATGTAAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGATCAG 62659
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | ||||| || || | || || |||||
Sbjct 62660 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAAT 62719
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || ||||| ||||| |||| || || ||
Sbjct 62720 ATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGGTAT 62769
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || |||||||| | || || ||||| || || | ||
Sbjct 62996 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAGGCCTCG 63055
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| || || || || ||||| || || ||||| ||
Sbjct 63056 GATACTATTGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAG 63115
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||||| ||||||| | ||| |||| || |||||
Sbjct 63116 CAGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAT 63175
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || |||||||| || | ||||||||| |||| | || ||||||
Sbjct 63176 ATCCAGAAGGAGTCCACTCTCCATTTGGTTCTGCGACTCCGCGGTGGC 63223
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || ||||| ||| | || || || ||||| || | ||
Sbjct 61655 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACAATCACCCTGGAAGTCGAGGCTTCG 61714
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||| || || || || ||||| || || ||||| |||
Sbjct 61715 GACACCATTGAAAACGTGAAGGCAAAGATCCAGGATAAGGAAGGTATTCCCCCCGACCAA 61774
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | ||||| || || | || || |||||
Sbjct 61775 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCAGACTACAAT 61834
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| ||| | || ||||| ||||| |||| || ||
Sbjct 61835 ATCCAAAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGAGG 61881
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 27039 GAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCA 27098
||| | || ||| | ||||||| || || || || || ||||| |||||||| ||
Sbjct 61907 GAAGCCTCGGACACCATTGAGAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCC 61966
Query 27099 CCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC 27158
||||| || |||||| | || | || |||||||| ||||||| || ||| | ||
Sbjct 61967 CCCGACCAGCAGCGTCTCATCTTTGCTGGCAAACAGCTGGAAGATGGTCGTACCCTCTCT 62026
Query 27159 GATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || ||||||||||| || | || | || | | |||| ||||||||
Sbjct 62027 GATTACAATATCCAAAAGGAGTCTACTCTCCACCTTGTGCTCAGACTGCGTGGTGGCAT 62085
>seq4196
Length=56364
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||||||||| ||||| || || || ||| | ||||| || ||||| || | ||
Sbjct 9692 CATGCAGATATTTGTGAAAACCCTCACGGGTAAGACCATTACCCTAGAAGTTGAGGCTTC 9751
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | |||||| ||||||||||| ||||| || || ||||| || ||
Sbjct 9752 AGATACTATCGAAAATGTCAAATCCAAAATTCAAGATAAAGAGGGTATTCCACCTGACCA 9811
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
|||| | | || | || ||||| || | |||||
Sbjct 9812 ACAGAGGCTTATTTTTGCTGGCAAGCAGCTTGAAGA 9847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429744523646135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |