Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq605 136 3e-27 >seq605 Length=553772 Score = 136 bits (150), Expect = 3e-27 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||||| || ||||| ||| ||| ||||| ||||| || || | ||||||||||| Sbjct 75831 ATGGCGCTGCCTCCGTGTCACGTCCTGTGCCAGTTCTATGTTGCTGACGGGGAGCTGTCG 75890 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 || |||||||| || || || | ||||||||| || || || || ||||||||||| || Sbjct 75891 TGTCAGCTCTACCAGCGGTCTGCAGACATGGGCTTGGGTGTTCCCTTCAACATTGCCAGC 75950 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || ||||| ||||| | |||||||||||| ||| Sbjct 75951 TATGCTCTCCTCACCTGCATGATCGCTCAAGTC 75983 Score = 136 bits (150), Expect = 3e-27 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| |||||||||||| | ||||| ||||| || || ||||||||||| || || || || Sbjct 75983 GACTTGAGCGATCATGCAGGTGAGGAGAGCATAGCTGGCAATGTTGAAGGGAACACCCAA 75924 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||| | || || || |||||||| || ||||||||||| | || || ||||| Sbjct 75923 GCCCATGTCTGCAGACCGCTGGTAGAGCTGACACGACAGCTCCCCGTCAGCAACATAGAA 75864 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||||| ||| ||| ||||| || |||||||| Sbjct 75863 CTGGCACAGGACGTGACACGGAGGCAGCGCCAT 75831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442789704440400