Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 194 4e-44
seq23011 149 1e-30
seq79008 113 1e-19
seq4196 111 4e-19
seq2269 89.7 1e-12
>seq6977
Length=186913
Score = 194 bits (214), Expect = 4e-44
Identities = 176/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| || |||||||| || || || || |||||||| || ||||| |||| || ||
Sbjct 62533 ACGAAGCCTGAGGACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGT 62474
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||||| |||||| || ||||| ||||| ||||||||||| || |||| ||
Sbjct 62473 GCGGCCGTCTTCCAACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCC 62414
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||| |||||| ||| |||||||||||||| || ||| ||| || |||||
Sbjct 62413 TTCCTTGTCCTGAATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAG 62354
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| || || | |||||
Sbjct 62353 GGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 62312
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || || ||||| ||||| ||||| ||||| || || |||| ||| ||
Sbjct 61192 ACGCAGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGT 61133
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||||||||||||| ||||| ||||| || |||||||| || |||| ||
Sbjct 61132 GCGGCCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGGAATACC 61073
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| ||||||||||| ||||| ||||| || || |||||| || || || ||
Sbjct 61072 TTCCTTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCGACTTCAAG 61013
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 61012 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || || ||||| || || || || ||||| ||||| || ||||| | |||||
Sbjct 60964 ACGCAGCCTAAGCACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCAGAGAGGGT 60905
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||| || ||||| |||||||| || ||||| || || || ||||| || |||| ||
Sbjct 60904 ACGTCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCC 60845
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| |||||||| || |||||||||||| |||||| |||||
Sbjct 60844 TTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCAGAGGCTTCAACTTCGAG 60785
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || || || | ||||||
Sbjct 60784 CGTGATGGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCAT 60743
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || |||||||| |||||||| || || || | | || | ||||||
Sbjct 61866 AGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCT 61807
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || |||||||| || |||| |||||||| |||
Sbjct 61806 TCAAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCC 61747
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| ||||||||||| |||||||| || || || || || ||||| |||
Sbjct 61746 TGGATCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGACTTCCAGGGTGATTGTC 61687
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| || || | |||||
Sbjct 61686 TTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 61655
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || || ||||| || || || || ||||| ||||| || ||||| | |||||
Sbjct 62989 ACGCAGCCTAAGCACAAGATGGAGGGTCGATTCTTTCTGGATATTGTAATCAGAGAGGGT 62930
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||||||| ||||| || ||||| || || || ||||| || |||| ||
Sbjct 62929 GCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCC 62870
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| |||||||| || |||||||| ||| ||| || |||||
Sbjct 62869 TTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAGGCTTCGACTTCGAG 62810
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || || || | ||||||
Sbjct 62809 GGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAAATCTGCAT 62768
Score = 159 bits (176), Expect = 8e-34
Identities = 168/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| |||| || || | || ||||||||||| || ||||| || || || | ||||||
Sbjct 63216 CGGAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTG 63157
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||||||||| ||||| || ||||| || || || ||||| || |||| |||
Sbjct 63156 CGGCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCT 63097
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| |||||||||||| ||||| ||||| || || || ||| || ||||| ||
Sbjct 63096 TCCTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGG 63037
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| ||||| || || | ||||||
Sbjct 63036 GTGATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996
Score = 158 bits (174), Expect = 3e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| |||||| || |||||||| || || ||||| || || || || || ||||| | ||
Sbjct 61651 TCCACGAAGCCTGAGGACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAG 61592
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || ||||||| |||||||| || || ||||| || || ||||| ||||| |
Sbjct 61591 AGTGCGACCGTCTTCCAATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGAT 61532
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|||||||||||||||||||||| ||||| ||||| |||||||| || || || ||
Sbjct 61531 TCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTC 61472
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| || ||||| ||||| || || | |||||
Sbjct 61471 CAGGGTAATAGTCTTGCCGGTGAGGGTCTTAACGAAAATTTGCAT 61427
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || |||||||| |||||||| || || || | | || | ||||||
Sbjct 62751 AGCACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCT 62692
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || || || || || |||| |||||||| |||
Sbjct 62691 TCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCTTCCTTATCC 62632
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || || ||||| |||||||| || ||| || ||||| ||||| |||
Sbjct 62631 TGGATCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTC 62572
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || ||||| || | |||||
Sbjct 62571 TTGCCAGTGAGTGTTTTTACGAAGATTTGCAT 62540
Score = 156 bits (172), Expect = 1e-32
Identities = 134/166 (81%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || |||||||| ||||| ||||| |||||||| || ||||| | |||||
Sbjct 62077 ACGCAGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAGAGGGT 62018
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||||||| ||||| || ||||| || || || ||||| || |||| ||
Sbjct 62017 ACGACCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCC 61958
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058
|||||||||||||||||| |||||||| || |||||||| |||
Sbjct 61957 TTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCAATGGTGTCCGAG 61912
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || | |||||||||||| || ||||| || || || || | |||||
Sbjct 61419 CGAAGACGCAGCACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTA 61360
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||||| ||| ||||| || |||||||| || || ||||||||||||| |||
Sbjct 61359 CGACCGTCTTCCAACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCT 61300
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| || || || || || || || || |||||||| || ||| || || |
Sbjct 61299 TCCTTATCTTGAATTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAG 61240
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || ||||| || ||||| | ||||||
Sbjct 61239 GTGATTGTCTTACCGGTTAGAGTTTTAACAAAAATCTGCAT 61199
>seq23011
Length=82770
Score = 149 bits (164), Expect = 1e-30
Identities = 130/162 (80%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| |||||||| |||||||| ||||| |||||||| || ||||| ||||| |||| ||
Sbjct 77561 CCTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACC 77620
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| |||||||| |||||| ||||| ||||| ||||| || ||||| ||
Sbjct 77621 TTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCAAG 77680
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| |||||||| || || || || | ||||||
Sbjct 77681 GGTGATGGTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 77722
>seq79008
Length=3354
Score = 113 bits (124), Expect = 1e-19
Identities = 88/105 (84%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| |||||||| |||||||| ||||| |||||||| || ||||| ||||| |||| ||
Sbjct 3244 CCTGCCATCTTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGATCAGGGGGAATACC 3303
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA 211057
||||||||| |||||||| |||||| ||||| ||||| |||||
Sbjct 3304 TTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGA 3348
>seq4196
Length=56364
Score = 111 bits (122), Expect = 4e-19
Identities = 121/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|||||||| ||||||||||| || || ||||| | ||||||||||| |||| || ||
Sbjct 9850 CCATCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCT 9791
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| || || || || ||| || |||||||| || || || ||||| || || ||
Sbjct 9790 TTATCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTA 9731
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| |||||||| || || ||||| | |||||| ||
Sbjct 9730 ATGGTCTTACCCGTGAGGGTTTTCACAAATATCTGCATGTT 9690
>seq2269
Length=58942
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
||||||||||| |||||||| |||||| ||||| ||||| ||||| || |||||
Sbjct 19103 CCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTATCAGAAGCCTCCACCTCA 19044
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| |||||||| || || || || | ||||||
Sbjct 19043 AGGGTGATGGTCTTCCCCGTGAGTGTTTTCACGAAGATCTGCAT 19000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1144646482353675
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