Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq6977 136 9e-27
seq4196 96.9 8e-15
>seq6977
Length=186913
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|| |||||||||||||| || || || || || || || |||||||| | | ||| |
Sbjct 61644 AGCCTGAGGACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGACAGAGTGCGA 61585
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| ||||| | || ||||| || ||||| | ||||||||| | | ||||||||||
Sbjct 61584 CCGTCTTCCAATTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCGGGAGGGATTCCTTCC 61525
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || ||| || ||| | || | | |||| ||| ||||||||| || |||
Sbjct 61524 TTGTCCTGGATCTTTGCCTTCACATTTTCAATGGTGTCCGAAGCCTCTACTTCCAGGGTA 61465
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||| ||||| | |||||
Sbjct 61464 ATAGTCTTGCCGGTGAGGGTCTTAACGAAAATTTGCAT 61427
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| || |||||||| || || ||||| ||||| ||||| || | | || |
Sbjct 61188 AGTCTGAGCACGAGATGAAGGGTGGATTCTTTCTGGATATTGTAGTCCGAAAGTGTGCGG 61129
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || |||||||| ||||| | ||| ||||| | | || ||||||
Sbjct 61128 CCATCTTCCAGCTGCTTGCCGGCGAAAATAAGACGCTGTTGGTCGGGGGGAATACCTTCC 61069
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | || | | || || ||| |||||||| ||
Sbjct 61068 TTATCCTGGATCTTAGCCTTCACATTTTCAATAGTATCAGAGGCCTCGACTTCAAGGGTG 61009
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||||||||||| ||||||
Sbjct 61008 ATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 60971
Score = 123 bits (136), Expect = 6e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| |||||||| ||||| || | ||||| | |||||||| |
Sbjct 62746 CAAG-TGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCAA 62688
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || |||||||||||||| | |||||| || | | || |||||||| || || |
Sbjct 62687 GCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCTTCCTTATCCTGGA 62628
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| || ||| | |||| | |||||||| || ||||| || || || || ||||
Sbjct 62627 TCTTTGCCTTTACATTTTCTATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTCTTGC 62568
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || || ||||||| |||||
Sbjct 62567 CAGTGAGTGTTTTTACGAAGATTTGCAT 62540
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| || || | ||| ||||| ||||| || ||||| ||||| || | | || |
Sbjct 63214 GAGTCGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCAGAAAGGGTGCG 63155
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || ||| ||||| ||||| || | ||||||||| | | || |||||
Sbjct 63154 GCCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATACCTTC 63095
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || ||| || ||| | || | | || || ||| || ||||| ||
Sbjct 63094 CTTATCCTGGATCTTTGCCTTCACATTTTCAATAGTATCCGAGGCCTCGACCTCAAGGGT 63035
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| ||||| ||||||||||||| ||||||
Sbjct 63034 GATTGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 62996
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| |||||||| ||||| || | ||||| | |||||||| |
Sbjct 61861 CAAG-TGCAGGGTGGACTCCTTTTGGATATTGTAGTCTGACAAAGTACGACCATCTTCAA 61803
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || |||||||||||||| | ||| ||||| | | || |||||||| || || |
Sbjct 61802 GCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGGGGAATACCTTCCTTATCCTGGA 61743
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| || || | || | | |||| ||| ||| ||||| || || || || || |
Sbjct 61742 TCTTTGCCTTCACGTTTTCAATGGTGTCCGAAGCCTCGACTTCCAGGGTGATTGTCTTTC 61683
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||||||||| | |||||
Sbjct 61682 CGGTGAGGGTCTTCACGAAAATTTGCAT 61655
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|| |||||||||||||| || ||||| |||||||| || || || || | || ||| |
Sbjct 62529 AGCCTGAGGACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCCGATAGAGTGCGG 62470
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| ||||| | || |||||||| ||||| | || ||||| | | || ||||||
Sbjct 62469 CCGTCTTCCAACTGCTTACCGGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCTTCC 62410
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || ||||| ||| |||||| | || | | | || || || ||||| || ||
Sbjct 62409 TTGTCCTGAATCTTTGCTTTGACGTTTTCGATGGTATCCGAGGCTTCGACTTCGAGGGTG 62350
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||| ||||| | |||||
Sbjct 62349 ATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 62312
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || || |||||||| |||||||| || | || || | || ||||| |
Sbjct 62290 CAAG-TGAAGGGTCGATTCTTTTTGAATGTTGTAGTCTGACAAGGTGCGGCCGTCTTCAA 62232
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||| ||||| | | || ||||| || || ||||
Sbjct 62231 GCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCTTTGTCCTGAA 62172
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || ||| |||| | | || || || |||||||||||||| || ||||
Sbjct 62171 TTTTAGCCTTCACATTCTCAATCGTATCCGAGGCTTCCACTTCAAGAGTAATCGTCTTGC 62112
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || |||||||| | ||||||
Sbjct 62111 CGGTCAGGGTTTTCACGAAAATCTGCAT 62084
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| || || ||||| || ||||| || | | || | || ||||| |
Sbjct 61405 CAAG-TGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGACAGGGTACGACCGTCTTCCA 61347
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || || |||||||| | ||||||||| | | || |||||||| |||||||
Sbjct 61346 ACTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGAA 61287
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || ||| |||| | | |||||||| || ||||| | || || || || |
Sbjct 61286 TTTTAGCCTTTACATTCTCAATGGTGTCTGAAGCTTCGACTTCCAAGGTGATTGTCTTAC 61227
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || ||||| || || || | ||||||
Sbjct 61226 CGGTTAGAGTTTTAACAAAAATCTGCAT 61199
Score = 93.3 bits (102), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| ||||| || ||||||||||| |||||||| |||||||| | | || |
Sbjct 62073 AGTCTGAGCACAAGGTGGAGAGTAGACTCCTTTTGGATATTGTAATCAGAGAGGGTACGA 62014
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || ||| || || ||||| || | ||||||||| | | || ||||||
Sbjct 62013 CCATCTTCCAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCTTCC 61954
Query 152007 TTTTCTTGAATTTT 152020
|| || || || ||
Sbjct 61953 TTGTCCTGGATCTT 61940
>seq4196
Length=56364
Score = 96.9 bits (106), Expect = 8e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || || ||||||||||| ||||| | | || || ||
Sbjct 9850 CCATCTTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGGTCAGGTGGAATACCCTCT 9791
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||||||||| ||||||| | || | | |||||| ||| ||||| || |||
Sbjct 9790 TTATCTTGAATTTTGGATTTGACATTTTCGATAGTATCTGAAGCCTCAACTTCTAGGGTA 9731
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || |||||||| || ||||| || | |||||| ||
Sbjct 9730 ATGGTCTTACCCGTGAGGGTTTTCACAAATATCTGCATGTT 9690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1139381996482345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |