Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1682337 107 1e-18 >seq1682337 Length=465 Score = 107 bits (118), Expect = 1e-18 Identities = 234/341 (69%), Gaps = 22/341 (6%) Strand=Plus/Minus Query 18807 TACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC-TGTCAATCAAACTATTT 18865 || ||||||||||||||||||| ||||| || ||||| ||| ||| | |||||| Sbjct 418 TATGGCTTCCAGTGGAGACATTACGGAGCAGATTATAAGGACATGT-TTGCTGACTATTC 360 Query 18866 ACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAA--TTAAA-ACAAACCCAGA 18922 | ||||| |||| || | | | |||||| | ||| ||||| ||||| || | Sbjct 359 AGGCCAAGGCGTCGACCAATTAAAGAATGTTAT---TTCAACGTTAAAGACAAATCC-TA 304 Query 18923 AAGCCGACGAATGATTATATCGT---CTTGGAATCCAAAGGATATCCCCTTAATGGTACT 18979 | | | | | ||||||| || |||||||||| || | || ||||| || Sbjct 303 ATGAC--AGGAGGATTATAATGTGTGCTTGGAATCCTGTAGACTTGCCTAAAATGGCTCT 246 Query 18980 ACCTCCATGTCA----CACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCC 19035 ||||| ||||| | ||| ||||| | || ||| |||| ||| | || |||| Sbjct 245 CCCTCCCTGTCATTGCCTCGT----CCAGTTCTTTGTAGCAGACGGAGAACTTTCGTGCC 190 Query 19036 AAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATG 19095 | | || || ||||| | || ||||| ||||| || || ||||| ||||| | |||| Sbjct 189 AGTTGTATCAAAGATCTGCTGACATGGGTCTTGGTGTTCCATTCAATATTGCAAGCTATG 130 Query 19096 CACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136 | |||||||| ||||| |||| ||||| || || || ||| Sbjct 129 CTCTTCTTACATACATGATAGCTCATGTCACTGGCCTCAAA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390627977807235