Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq630901 111 2e-19 seq849147 100 3e-16 >seq630901 Length=3269 Score = 111 bits (122), Expect = 2e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 ||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||| | | Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022 Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 24729 |||||||||||||||| ||| ||||| | ||||||||| |||| |||| Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTTT 1071 >seq849147 Length=1753 Score = 100 bits (110), Expect = 3e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 ||||||| ||||| ||||| | ||||||| ||| | || || || || || | || Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || || |||||||| ||||| ||||| || ||||| |||| || || | Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATA 53022 |||||| ||||||||||| |||||||| Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580192295205840