Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1770947 102 1e-16 seq1475270 87.8 3e-12 seq922613 86.0 9e-12 >seq1770947 Length=686 Score = 102 bits (112), Expect = 1e-16 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 |||||| | ||| | ||||| | ||||| || |||||||||||||||| Sbjct 312 CCAACAAAACCACTAGGATCTCTACCATCCATGCTGTATTTATCATTTAAATAAATAGCG 371 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || |||||||| || || || ||||| || | ||||||||| ||||||||||| Sbjct 372 TTGGCTAAAGCTTCTTCAGGAGACTTCGTCCACTCAAGTATTTTTTTTGCCCAATACATG 431 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 | || | |||||||||||||| | | | | |||| | || | || |||||||||| Sbjct 432 CGCAAGAAACCATGCATTTTACCTTCCTTGACTAATTGTATCTGAGCTGAATTCCATAAA 491 Query 203048 TTGTCATGAGTT 203059 | ||||| ||| Sbjct 492 TCATCATGTGTT 503 >seq1475270 Length=306 Score = 87.8 bits (96), Expect = 3e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||| |||||||||||||| || ||||| |||||||| || | || ||||| |||||| Sbjct 171 AAAATCCAAGATAAAGAAGGAATTCCACCAGATCAACAGAGATTGATATTTGCGGGAAAA 112 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAG 124728 || | || || |||| || || |||||| |||||||| |||| Sbjct 111 CAGCTTGAAGACGGTCGTACCTTGTCAGATTACAATATTCAGAAAG 66 >seq922613 Length=1439 Score = 86.0 bits (94), Expect = 9e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | ||||| | ||||| || ||||| || |||| | ||| || Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| || || || |||||||| || || || || |||||| Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||||||||| || ||||| | |||||| | || ||| | || || ||| Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255 Query 124719 ATTCAAAAAG 124728 || || |||| Sbjct 256 ATCCAGAAAG 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738241206934400