Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25]
1,822,983 sequences; 1,248,087,067 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1770947 102 1e-16
seq1475270 87.8 3e-12
seq922613 86.0 9e-12
>seq1770947
Length=686
Score = 102 bits (112), Expect = 1e-16
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927
|||||| | ||| | ||||| | ||||| || ||||||||||||||||
Sbjct 312 CCAACAAAACCACTAGGATCTCTACCATCCATGCTGTATTTATCATTTAAATAAATAGCG 371
Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987
|| |||||||| || || || ||||| || | ||||||||| |||||||||||
Sbjct 372 TTGGCTAAAGCTTCTTCAGGAGACTTCGTCCACTCAAGTATTTTTTTTGCCCAATACATG 431
Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047
| || | |||||||||||||| | | | | |||| | || | || ||||||||||
Sbjct 432 CGCAAGAAACCATGCATTTTACCTTCCTTGACTAATTGTATCTGAGCTGAATTCCATAAA 491
Query 203048 TTGTCATGAGTT 203059
| ||||| |||
Sbjct 492 TCATCATGTGTT 503
>seq1475270
Length=306
Score = 87.8 bits (96), Expect = 3e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
||||| |||||||||||||| || ||||| |||||||| || | || ||||| ||||||
Sbjct 171 AAAATCCAAGATAAAGAAGGAATTCCACCAGATCAACAGAGATTGATATTTGCGGGAAAA 112
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAG 124728
|| | || || |||| || || |||||| |||||||| ||||
Sbjct 111 CAGCTTGAAGACGGTCGTACCTTGTCAGATTACAATATTCAGAAAG 66
>seq922613
Length=1439
Score = 86.0 bits (94), Expect = 9e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||||||| | ||||| | ||||| || ||||| || |||| | ||| ||
Sbjct 76 ATGCAAATATTTGTGAAGACTTTGACAGGAAAGACTATTACATTAGAAGTGGAACCATCA 135
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || || | ||| || || || |||||||| || || || || ||||||
Sbjct 136 GACACTATCGAGAACGTCAAAGCCAAGATCCAGGATAAAGAGGGAATCCCTCCAGATCAA 195
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | ||||||||||| || ||||| | |||||| | || ||| | || || |||
Sbjct 196 CAGCGTCTTATTTTTGCTGGGAAACAGCTTGAGGATGGCCGCACACTTTCTGACTACAAT 255
Query 124719 ATTCAAAAAG 124728
|| || ||||
Sbjct 256 ATCCAGAAAG 265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738241206934400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |