Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq293771 87.8 2e-12 seq602041 82.4 9e-11 >seq293771 Length=447 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| ||| ||| |||| | ||||||||||||||||||||| |||||||||| ||| Sbjct 78 AAAAATATTCCTCCCCGGCGGTTAATCGAACCCTGGTCTCCCGCCTGACAGGCGGGGATA 19 Query 60116 CTCACCACTATACTACCG 60133 || |||||||| |||||| Sbjct 18 CTGACCACTATGCTACCG 1 >seq602041 Length=700 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/79 (84%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| | |||| |||| ||||||||||| | |||||||||||||| | |||| || Sbjct 83 AAAAATTATTCCTCCCCGGCCGGGAATCGAACTCCGGTCTCCCGCGTGATAAGCGGGGAT 24 Query 60115 ACTCACCACTATACTACCG 60133 ||| |||||||| |||||| Sbjct 23 ACTGACCACTATGCTACCG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558787427951240