Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1778735 89.7 5e-13 seq630901 87.8 2e-12 >seq1778735 Length=727 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 58134 TTTCCAGATATTGTAGAATTTTGCGAACGTATGGCAAACGATGGAAAAATTGTAATAGTT 58193 ||||||||| | ||||||||| | ||| ||||||||| || ||||||||||| ||| Sbjct 308 TTTCCAGATGTGGTAGAATTTAGTGAAGAGATGGCAAACAGAGGTAAAATTGTAATGGTT 249 Query 58194 GCTGCTTTAGACGGTACATTTTTAAGAGAGCCATTTGGAAATATTTTAAAATTAATACCA 58253 || || | ||||| || | | ||||| ||||| |||||| ||| || ||||| Sbjct 248 GCAGCACTGGACGGAACTTATCAAAGAGTTGGTTTTGGCAATATTCTAAGTTTGGTACCA 189 Query 58254 TGTGCTGAGTACGTTTCAAAGCTTACAGCCGTTTGCATGAATTGTTTTA 58302 ||||| ||| |||| | || ||||| |||||| ||| |||| Sbjct 188 CTGGCTGAAAGTGTTATAAAGTTGACTGCCGTCTGCATGTCTTGCTTTA 140 >seq630901 Length=3269 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTC 16783 || || | ||| || |||||| |||||||||||||||| ||||||| |||||||| | | Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022 Query 16784 CATATGTCTTCGTAAACAATAGGAAACACAACA 16816 || ||||| | || |||||||||| |||||| Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACA 1055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451972606083800