Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq849147 100 4e-16 seq630901 100 4e-16 >seq849147 Length=1753 Score = 100 bits (110), Expect = 4e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 ||||||| ||||| ||||| | ||||||| ||| | || || || || || | || Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| || || |||||||| ||||| ||||| || ||||| |||| || || | Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATA 62260 |||||| ||||||||||| |||||||| Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480 >seq630901 Length=3269 Score = 100 bits (110), Expect = 4e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 ||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||| | | Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022 Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175 |||||||||||||||| || || || | ||||||||| |||| ||| Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTT 1070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615465765276240