Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq630901 100 4e-16 seq849147 96.9 5e-15 >seq630901 Length=3269 Score = 100 bits (110), Expect = 4e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 ||||| | ||| |||||||| | |||||||| || ||||| ||||| |||||||| | | Sbjct 963 TTAGACAGATCAACTTCTTCTGCAGTCCAAAAAGAAGCCTCAGCCTTCTTATACATGTGC 1022 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 |||||||||||||||| || || || | ||||||||| |||| ||| Sbjct 1023 CAGATGTCATGATATTCAATAGGAAATACAACAAATCTTCTTGGGTTT 1070 >seq849147 Length=1753 Score = 96.9 bits (106), Expect = 5e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 ||||||| || || ||||| | ||||||| ||| | || || || || || | || Sbjct 333 TCCATCCATAAAAGTGCATCGAAGACAGTTTGGCGTAATTAGGTTCAGCAATGTGTACAT 392 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || || |||||||| ||||| ||||| || ||||| |||| || || | Sbjct 393 TCAAAGACTGCGACTGGTCGATGAAAGCTCCTCTGTCGGCGGCCATCTTTAAAATTGTTT 452 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATA 78932 |||||| ||||||||||| |||||||| Sbjct 453 TTTGTGAAATTTCCCAAACTGTTTTATA 480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701901402352120