Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1682337 141 1e-28 >seq1682337 Length=465 Score = 141 bits (156), Expect = 1e-28 Identities = 245/351 (70%), Gaps = 4/351 (1%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||| |||| |||||||| || ||||||||||| || | || | | ||| ||| Sbjct 436 GGAGATTTGGGTCCAGTGTATGGCTTCCAGTGGAGACATTACGGAGCAGATTATAAGGAC 377 Query 70127 -TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 || | | |||||||| || || || || || ||||| ||| | ||| || | Sbjct 376 ATGTTTG-CTGACTATTCAGGCCAAGGCGTCGACCAATTAAAGAATGTTATTTCAACGTT 318 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 ||||| ||||| | || |||||||| ||||||| | |||||||||| ||| |||| Sbjct 317 AAAGACAAATCCTAATGACAGGAGGATTATAATGTGTGCTTGGAATCCTGTAGACTTGCC 258 Query 70246 CCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTT-TTACTCGTACGATGGCAAAT 70304 ||||||| || || || ||||| || | | ||||| || | | | || || || Sbjct 257 TAAAATGGCTCTCCCTCCCTGTCATTGCCTCGTCCAGTTCTTTGTAGCA-GACGGAGAAC 199 Query 70305 TGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTG 70364 | || ||| ||||||| || ||| |||||||| || ||||| || || || |||| Sbjct 198 TTTCGTGCCAGTTGTATCAAAGATCTGCTGACATGGGTCTTGGTGTTCCATTCAATATTG 139 Query 70365 CAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAG 70415 |||||||| || | | || ||||||| ||||| | || ||||| |||| Sbjct 138 CAAGCTATGCTCTTCTTACATACATGATAGCTCATGTCACTGGCCTCAAAG 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 724172470955080